RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 SOCS5O75159 536 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 CREG1O75629 220 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 PSMD10O75832 226 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 HSP90AA1P07900 732 aaKnown RBP3.12□□□□□ -1.91
CD46-215ENST00000488596 POLR2CP19387 275 aaPredicted RBP3.12□□□□□ -1.91
CD46-215ENST00000488596 ARCN1P48444 511 aaKnown RBP3.12□□□□□ -1.91
CD46-215ENST00000488596 LMAN1P49257 510 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 LIG4P49917 911 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 ZNF132P52740 706 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 CDH13P55290 713 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 KRTAP10-12P60413 245 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 UBXN2AP68543 259 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 AIMP1Q12904 312 aaKnown RBP3.12□□□□□ -1.91
CD46-215ENST00000488596 BAATQ14032 418 aaPredicted RBP3.12□□□□□ -1.91
CD46-215ENST00000488596 ZNF234Q14588 700 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 C15orf59Q2T9L4 293 aaPredicted RBP3.12□□□□□ -1.91
CD46-215ENST00000488596 C6orf163Q5TEZ5 329 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 ADALQ6DHV7 355 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 FAM171BQ6P995 826 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 TEX38Q6PEX7 206 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 UNQ6126/PRO20091Q6UXV3 157 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 HAUS6Q7Z4H7 955 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 ADGRA1Q86SQ6 560 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 PRPF39Q86UA1 669 aaKnown RBP3.12□□□□□ -1.91
CD46-215ENST00000488596 GUF1Q8N442 669 aaKnown RBP3.12□□□□□ -1.91
CD46-215ENST00000488596 RBM15BQ8NDT2 890 aaKnown RBP3.12□□□□□ -1.91
CD46-215ENST00000488596 WDR20Q8TBZ3 569 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 SEMA4DQ92854 862 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 PHF21AQ96BD5 680 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 ERLEC1Q96DZ1 483 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 OXNAD1Q96HP4 312 aaPredicted RBP3.12□□□□□ -1.91
CD46-215ENST00000488596 IGSF21Q96ID5 467 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 PRMT6Q96LA8 375 aaPredicted RBP3.12□□□□□ -1.91
CD46-215ENST00000488596 FAM81BQ96LP2 452 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 IL17FQ96PD4 163 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 CCDC106Q9BWC9 280 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 MMP27Q9H306 513 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 DDX31Q9H8H2 851 aaKnown RBP3.12□□□□□ -1.91
CD46-215ENST00000488596 TRPC7Q9HCX4 862 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 SLC35C2Q9NQQ7 365 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 MORF4L1Q9UBU8 362 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 AMACRQ9UHK6 382 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 POU2F3Q9UKI9 436 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 PPIEQ9UNP9 301 aaKnown RBP3.12□□□□□ -1.91
CD46-215ENST00000488596 TRPV2Q9Y5S1 764 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 NOTCH3Q9UM47 2321 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 LOC100509620A0A075B734 347 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 ZCWPW2A0A1B0GU75 182 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 HEPACAM2A8MVW5 462 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 MAGEB17A8MXT2 336 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 H0YIN7 160 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 TO15178 435 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 BMP10O95393 424 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 GCNT3O95395 438 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 CGAP01215 116 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 TPOP07202 933 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 FAM106CPP0CH98 169 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 NR2F2P24468 414 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 MATR3P43243 847 aaKnown RBP eCLIP3.11□□□□□ -1.915e-7■■■■■ 27
CD46-215ENST00000488596 ARSEP51690 589 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 PPP5CP53041 499 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 CTSCP53634 463 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 SNRPEP62304 92 aaKnown RBP3.11□□□□□ -1.91
CD46-215ENST00000488596 PLIN5Q00G26 463 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 TROAPQ12815 778 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 PRKAA1Q13131 559 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 MELKQ14680 651 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 RASA2Q15283 850 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 RAB6CQ53S08 254 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 TMEM211Q6ICI0 200 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 RPUSD3Q6P087 351 aaKnown RBP3.11□□□□□ -1.91
CD46-215ENST00000488596 FIGLAQ6QHK4 219 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 TUBA1AQ71U36 451 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 PLPPR4Q7Z2D5 763 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 DSG4Q86SJ6 1040 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 SLC9B2Q86UD5 537 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 CEP57Q86XR8 500 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 C1orf52Q8N6N3 182 aaKnown RBP3.11□□□□□ -1.91
CD46-215ENST00000488596 POGLUT1Q8NBL1 392 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 CCDC191Q8NCU4 936 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 LPGAT1Q92604 370 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 ZNF622Q969S3 477 aaKnown RBP eCLIP3.11□□□□□ -1.912e-9■□□□□ 9.2
CD46-215ENST00000488596 LINGO1Q96FE5 620 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 ZNF582Q96NG8 517 aaPredicted RBP3.11□□□□□ -1.91
CD46-215ENST00000488596 DUX5Q96PT3 197 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 SLC22A12Q96S37 553 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 OLFM1Q99784 485 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 TUBA1CQ9BQE3 449 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 C16orf70Q9BSU1 422 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 POLR3CQ9BUI4 534 aaPredicted RBP3.11□□□□□ -1.91
CD46-215ENST00000488596 TXLNGYQ9BZA5 131 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 RAB6CQ9H0N0 254 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 DENND2DQ9H6A0 471 aaPredicted RBP3.11□□□□□ -1.91
CD46-215ENST00000488596 RETREG1Q9H6L5 497 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 SLA2Q9H6Q3 261 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 TAB2Q9NYJ8 693 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 GDE1Q9NZC3 331 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 NPAP1Q9NZP6 1156 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 MARCH4Q9P2E8 410 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms