RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 TRBV5-4A0A0C4DH59 114 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 KLHL33A6NCF5 533 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 MROH6A6NGR9 719 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 CFAP99D6REC4 459 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 STMND1H3BQB6 276 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 CAPN5O15484 640 aaPredicted RBP11.21□□□□□ -0.61
SPEN-205ENST00000487496 SUN1O94901 812 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 ANKRD34CP0C6C1 535 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 PRSS56P0CW18 603 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 ATP1B2P14415 290 aaPredicted RBP11.21□□□□□ -0.61
SPEN-205ENST00000487496 ETS1P14921 441 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 PSMA3P25788 255 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 FDFT1P37268 417 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 CAPZBP47756 277 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 LEPRP48357 1165 aaKnown RBP11.21□□□□□ -0.61
SPEN-205ENST00000487496 RAB15P59190 212 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 MC2RQ01718 297 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 RHDQ02161 417 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 CDH17Q12864 832 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 SEPT6Q14141 434 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 SIX1Q15475 284 aaPredicted RBP11.21□□□□□ -0.61
SPEN-205ENST00000487496 CCNG2Q16589 344 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 ZRANB3Q5FWF4 1079 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 MANEAQ5SRI9 462 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 PCSK4Q6UW60 755 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 XKR5Q6UX68 686 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 SERPINA9Q86WD7 417 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 CFAP206Q8IYR0 622 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 LSM14AQ8ND56 463 aaKnown RBP11.21□□□□□ -0.61
SPEN-205ENST00000487496 TRIM58Q8NG06 486 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 OR52K1Q8NGK4 314 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 GPR150Q8NGU9 434 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 STYXQ8WUJ0 223 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 JPH3Q8WXH2 748 aaPredicted RBP11.21□□□□□ -0.61
SPEN-205ENST00000487496 TGM7Q96PF1 710 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 INSM2Q96T92 566 aaPredicted RBP11.21□□□□□ -0.61
SPEN-205ENST00000487496 TLR10Q9BXR5 811 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 WWP1Q9H0M0 922 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 FBXO8Q9NRD0 319 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 IMP3Q9NV31 184 aaKnown RBP11.21□□□□□ -0.61
SPEN-205ENST00000487496 FAM8A1Q9UBU6 413 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 ACSL5Q9ULC5 683 aa11.21□□□□□ -0.61
SPEN-205ENST00000487496 EIF4E1BA6NMX2 242 aaKnown RBP11.2□□□□□ -0.62
SPEN-205ENST00000487496 E7EVH7 732 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 ERVH48-1M5A8F1 160 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 TK2O00142 265 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 TOX3O15405 576 aaPredicted RBP11.2□□□□□ -0.62
SPEN-205ENST00000487496 POLBP06746 335 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 MTHFD1P11586 935 aaKnown RBP11.2□□□□□ -0.62
SPEN-205ENST00000487496 ACRV1P26436 265 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 GRIA1P42261 906 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 LMAN1P49257 510 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 PRLHRP49683 370 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 CACNG1Q06432 222 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 SEMA5AQ13591 1074 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 SKIDA1Q1XH10 827 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 CCDC38Q502W7 563 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 TAS2R42Q7RTR8 314 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 VASH2Q86V25 355 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 PIANPQ8IYJ0 282 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 LILRA3Q8N6C8 439 aaPredicted RBP11.2□□□□□ -0.62
SPEN-205ENST00000487496 CCDC89Q8N998 374 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 DNAAF3Q8N9W5 541 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 GLIS1Q8NBF1 620 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 SPDYE1Q8NFV5 336 aaPredicted RBP11.2□□□□□ -0.62
SPEN-205ENST00000487496 SLC39A7Q92504 469 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 NKD1Q969G9 470 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 ZDHHC12Q96GR4 267 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 TEFMQ96QE5 360 aaKnown RBP11.2□□□□□ -0.62
SPEN-205ENST00000487496 CTRCQ99895 268 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 SPRY4Q9C004 299 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 RAB33BQ9H082 229 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 APMAPQ9HDC9 416 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 RAB6BQ9NRW1 208 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 EPHA6Q9UF33 1036 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 DRG1Q9Y295 367 aaKnown RBP11.2□□□□□ -0.62
SPEN-205ENST00000487496 PPP2R2CQ9Y2T4 447 aa11.2□□□□□ -0.62
SPEN-205ENST00000487496 CFAP20Q9Y6A4 193 aaKnown RBP11.2□□□□□ -0.62
SPEN-205ENST00000487496 ZNF106Q9H2Y7 1883 aaKnown RBP11.2□□□□□ -0.62
SPEN-205ENST00000487496 C17orf113A0A1B0GUU1 675 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 CCDC78A2IDD5 438 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 NRDCO43847 1150 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 KIF1CO43896 1103 aaKnown RBP11.19□□□□□ -0.62
SPEN-205ENST00000487496 GAS8O95995 478 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 FGGP02679 453 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 SLC35G4P0C7Q5 338 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 ZSCAN5DPP0CG00 497 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 WT1P19544 449 aaPredicted RBP11.19□□□□□ -0.62
SPEN-205ENST00000487496 MSNP26038 577 aaKnown RBP11.19□□□□□ -0.62
SPEN-205ENST00000487496 RPL22P35268 128 aaKnown RBP11.19□□□□□ -0.62
SPEN-205ENST00000487496 SEPHS1P49903 392 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 DBN1Q16643 649 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 TAF1BQ53T94 588 aaPredicted RBP11.19□□□□□ -0.62
SPEN-205ENST00000487496 KIAA1614Q5VZ46 1190 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 CAPRIN2Q6IMN6 1127 aaKnown RBP11.19□□□□□ -0.62
SPEN-205ENST00000487496 IRGCQ6NXR0 463 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 DUS1LQ6P1R4 473 aaKnown RBP11.19□□□□□ -0.62
SPEN-205ENST00000487496 DRICH1Q6PGQ1 229 aaPredicted RBP11.19□□□□□ -0.62
SPEN-205ENST00000487496 CEACAM20Q6UY09 585 aa11.19□□□□□ -0.62
SPEN-205ENST00000487496 PPP1R21Q6ZMI0 780 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms