RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 TEX30Q5JUR7 227 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 COLEC12Q5KU26 742 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 SAPCD1Q5SSQ6 148 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 THEM4Q5T1C6 240 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 GPATCH4Q5T3I0 446 aaKnown RBP5.42□□□□□ -1.54
COPS3-209ENST00000486810 CERCAMQ5T4B2 595 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 PLAG1Q6DJT9 500 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 PLEKHA7Q6IQ23 1121 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 DPY19L2P1Q6NXN4 242 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 WDR73Q6P4I2 378 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 PAPD4Q6PIY7 484 aaKnown RBP5.42□□□□□ -1.54
COPS3-209ENST00000486810 CCNI2Q6ZMN8 369 aaPredicted RBP5.42□□□□□ -1.54
COPS3-209ENST00000486810 STXBP4Q6ZWJ1 553 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 PARS2Q7L3T8 475 aaKnown RBP5.42□□□□□ -1.54
COPS3-209ENST00000486810 NIPA1Q7RTP0 329 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 KDELC2Q7Z4H8 507 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 GALNTL5Q7Z4T8 443 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 CTAGE6Q86UF2 777 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 HPS6Q86YV9 775 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 ERI1Q8IV48 349 aaKnown RBP5.42□□□□□ -1.54
COPS3-209ENST00000486810 CTAGE4Q8IX94 777 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 DCP1BQ8IZD4 617 aaKnown RBP5.42□□□□□ -1.54
COPS3-209ENST00000486810 CRYBG2Q8N1P7 616 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 PYROXD2Q8N2H3 581 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 ANKFN1Q8N957 763 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 ZBTB44Q8NCP5 570 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 SLC24A4Q8NFF2 622 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 CLHC1Q8NHS4 586 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 NCOA7Q8NI08 942 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 RP9Q8TA86 221 aaKnown RBP5.42□□□□□ -1.54
COPS3-209ENST00000486810 METTL6Q8TCB7 284 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 EDC3Q96F86 508 aaKnown RBP5.42□□□□□ -1.54
COPS3-209ENST00000486810 LTV1Q96GA3 475 aaPredicted RBP5.42□□□□□ -1.54
COPS3-209ENST00000486810 PDXPQ96GD0 296 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 FAR2Q96K12 515 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 XPO6Q96QU8 1125 aaKnown RBP5.42□□□□□ -1.54
COPS3-209ENST00000486810 PRR25Q96S07 402 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 PIGSQ96S52 555 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 HEMGNQ9BXL5 484 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 WDR12Q9GZL7 423 aaKnown RBP5.42□□□□□ -1.54
COPS3-209ENST00000486810 DCLRE1BQ9H816 532 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 SPACA1Q9HBV2 294 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 RPRD1BQ9NQG5 326 aaKnown RBP5.42□□□□□ -1.54
COPS3-209ENST00000486810 C20orf96Q9NUD7 363 aaPredicted RBP5.42□□□□□ -1.54
COPS3-209ENST00000486810 CYP39A1Q9NYL5 469 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 COX16Q9P0S2 106 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 ADD3Q9UEY8 706 aaKnown RBP5.42□□□□□ -1.54
COPS3-209ENST00000486810 SRP68Q9UHB9 627 aaKnown RBP5.42□□□□□ -1.54
COPS3-209ENST00000486810 FAM153AQ9UHL3 310 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 CYB5R1Q9UHQ9 305 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 GNPTGQ9UJJ9 305 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 CAPN11Q9UMQ6 739 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 B3GNT3Q9Y2A9 372 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 ZNF521Q96K83 1311 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 JCADQ9P266 1359 aa5.42□□□□□ -1.54
COPS3-209ENST00000486810 CDC42BPAQ5VT25 1732 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 TMEM210A6NLX4 147 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 RHPN2P1A8MT19 583 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 H0YCG3 227 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 KRT86O43790 486 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 MED24O75448 989 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 SEMA3DO95025 777 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 PDE8BO95263 885 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 RASAL1O95294 804 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 HSPA4LO95757 839 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 PTBP3O95758 552 aaKnown RBP5.41□□□□□ -1.54
COPS3-209ENST00000486810 CALB1P05937 261 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 HGFP14210 728 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 TSHRP16473 764 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 GJA1P17302 382 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 CHMP24386 653 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 IL1R2P27930 398 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 NMT1P30419 496 aaKnown RBP5.41□□□□□ -1.54
COPS3-209ENST00000486810 RRM2P31350 389 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 CDH5P33151 784 aaPredicted RBP5.41□□□□□ -1.54
COPS3-209ENST00000486810 IL6STP40189 918 aaPredicted RBP5.41□□□□□ -1.54
COPS3-209ENST00000486810 CCR10P46092 362 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 OR1G1P47890 313 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 PRIM2P49643 509 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 SLC26A2P50443 739 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 ARHGDIAP52565 204 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 RAB4BP61018 213 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 TIAL1Q01085 375 aaKnown RBP eCLIP5.41□□□□□ -1.54
COPS3-209ENST00000486810 NAB1Q13506 487 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 ARHGAP19Q14CB8 494 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 EFTUD2Q15029 972 aaKnown RBP eCLIP5.41□□□□□ -1.547e-10■■■■■ 51.8
COPS3-209ENST00000486810 ZNF829Q3KNS6 432 aaPredicted RBP5.41□□□□□ -1.54
COPS3-209ENST00000486810 FAM153CQ494X1 144 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 HSP90AA4PQ58FG1 418 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 PCID2Q5JVF3 399 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 TCHHL1Q5QJ38 904 aaPredicted RBP5.41□□□□□ -1.54
COPS3-209ENST00000486810 HES5Q5TA89 166 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 KLHDC7AQ5VTJ3 777 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 C1orf146Q5VVC0 180 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 DCLRE1AQ6PJP8 1040 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 LRIG3Q6UXM1 1119 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 C4orf50Q6ZRC1 276 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 TPGS1Q6ZTW0 290 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 ASRGL1Q7L266 308 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 FJX1Q86VR8 437 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms