RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 C8orf82Q6P1X6 216 aaPredicted RBP11.77□□□□□ -0.53
PKP4-213ENST00000486254 ZFP1Q6P2D0 407 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 TECPR1Q7Z6L1 1165 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 NLRP8Q86W28 1048 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 GALNT13Q8IUC8 556 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 TMEM126BQ8IUX1 230 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 MIER2Q8N344 545 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 CLDN19Q8N6F1 224 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 PCYOX1LQ8NBM8 494 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 VN1R2Q8NFZ6 395 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 ING5Q8WYH8 240 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 PPP2R3CQ969Q6 453 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 RHBDF1Q96CC6 855 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 CLPTM1LQ96KA5 538 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 MAGEB10Q96LZ2 347 aaPredicted RBP11.77□□□□□ -0.53
PKP4-213ENST00000486254 C3orf30Q96M34 536 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 LRRC3BQ96PB8 259 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 NTMT1Q9BV86 223 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 EPHX3Q9H6B9 360 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 PCDH12Q9NPG4 1184 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 THG1LQ9NWX6 298 aaKnown RBP11.77□□□□□ -0.53
PKP4-213ENST00000486254 CACNA2D2Q9NY47 1150 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 EIF2B4Q9UI10 523 aaKnown RBP11.77□□□□□ -0.53
PKP4-213ENST00000486254 ZNF225Q9UK10 706 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 FIS1Q9Y3D6 152 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 EDDM13A0A1B0GTR0 161 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 PPP6CO00743 305 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 PER2O15055 1255 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 NRP2O60462 931 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 TRIM16O95361 564 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 FTH1P02794 183 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 CTSLP07711 333 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 GSTM1P09488 218 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 MYOGP15173 224 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 ITGB7P26010 798 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 AGTR2P50052 363 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 HNMTP50135 292 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 FOXA1P55317 472 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 AP1S2P56377 157 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 ERVK-8P63133 956 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 GSTM4Q03013 218 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 FCHO2Q0JRZ9 810 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 ELP6Q0PNE2 266 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 TRAF3Q13114 568 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 GTF2H2Q13888 395 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 ELAVL3Q14576 367 aaKnown RBP11.76□□□□□ -0.53
PKP4-213ENST00000486254 ZNF423Q2M1K9 1284 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 HNRNPA1L2Q32P51 320 aaKnown RBP11.76□□□□□ -0.53
PKP4-213ENST00000486254 PDCD4Q53EL6 469 aaKnown RBP11.76□□□□□ -0.53
PKP4-213ENST00000486254 FAM78AQ5JUQ0 283 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 GTF2H2CQ6P1K8 395 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 PRMT9Q6P2P2 845 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 LRRC70Q7Z2Q7 622 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 GOLGA7Q7Z5G4 137 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 ADGRD2Q7Z7M1 963 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 KBTBD6Q86V97 674 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 SPNS2Q8IVW8 549 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 TUBGCP3Q96CW5 907 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 RSPRY1Q96DX4 576 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 CCDC97Q96F63 343 aaPredicted RBP11.76□□□□□ -0.53
PKP4-213ENST00000486254 SLC12A9Q9BXP2 914 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 SLC29A3Q9BZD2 475 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 AIG1Q9NVV5 245 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 ZIM2Q9NZV7 527 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 PCDH10Q9P2E7 1040 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 SUCOQ9UBS9 1254 aaKnown RBP11.76□□□□□ -0.53
PKP4-213ENST00000486254 TRPS1Q9UHF7 1281 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 TMPRSS11EQ9UL52 423 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 NDUFAF1Q9Y375 327 aa11.76□□□□□ -0.53
PKP4-213ENST00000486254 MKI67P46013 3256 aaKnown RBP11.76□□□□□ -0.53
PKP4-213ENST00000486254 C16orf96A6NNT2 1141 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 K7EPI3 171 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 BNIP3LO60238 219 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 KATNA1O75449 491 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 ANXA5P08758 320 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 BMP1P13497 986 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 TSPAN8P19075 237 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 FSHRP23945 695 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 CCR3P51677 355 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 RCAN2Q14206 197 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 CBX2Q14781 532 aaPredicted RBP11.75□□□□□ -0.53
PKP4-213ENST00000486254 RBBP7Q16576 425 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 ZNF284Q2VY69 593 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 GGTA1PQ4G0N0 100 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 AGKQ53H12 422 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 ARSIQ5FYB1 569 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 ZNF697Q5TEC3 545 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 IRAK1BP1Q5VVH5 260 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 REP15Q6BDI9 236 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 LRRC74BQ6ZQY2 392 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 PRR23BQ6ZRT6 265 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 GPR149Q86SP6 731 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 DDIASQ8IXT1 998 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 CYB5D2Q8WUJ1 264 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 FGF13Q92913 245 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 DCUN1D1Q96GG9 259 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 SPATA16Q9BXB7 569 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 TRIM54Q9BYV2 358 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 CD244Q9BZW8 370 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 S100A14Q9HCY8 104 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms