RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 PITX1P78337 314 aaPredicted RBP4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 NEXNQ0ZGT2 675 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 C6orf141Q5SZD1 244 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 FAM69AQ5T7M9 428 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 PMS2CLQ68D20 193 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 PQLC2Q6ZP29 291 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 COPS6Q7L5N1 327 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 DSG4Q86SJ6 1040 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 APOBEC3FQ8IUX4 373 aaKnown RBP4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 RNF113BQ8IZP6 322 aaKnown RBP4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 IL17RCQ8NAC3 791 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 OR13A1Q8NGR1 328 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 NFKBIDQ8NI38 313 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 RAET1EQ8TD07 263 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 ST8SIA4Q92187 359 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 SLC25A18Q9H1K4 315 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 WASH6PQ9NQA3 447 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 ZFP57Q9NU63 452 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 SLC13A4Q9UKG4 626 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 RALYQ9UKM9 306 aaKnown RBP4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 PADI1Q9ULC6 663 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 LOXL2Q9Y4K0 774 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 SPTBN4Q9H254 2564 aa4.48□□□□□ -1.69
SMARCC1-207ENST00000485833 LILRA5A6NI73 299 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 LRRC53A6NM62 1247 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 SEC31AO94979 1220 aaKnown RBP4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 ITGA2P17301 1181 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 XBP1P17861 261 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 EIF2S2P20042 333 aaKnown RBP4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 MARK3P27448 753 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 ABCD3P28288 659 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 GNL1P36915 607 aaPredicted RBP4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 RBM39Q14498 530 aaKnown RBP4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 FGFBP1Q14512 234 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 GSTA3Q16772 222 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 ALG11Q2TAA5 492 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 COL28A1Q2UY09 1125 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 USP41Q3LFD5 358 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 FAM109BQ6ICB4 259 aaPredicted RBP4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 MARK2Q7KZI7 788 aaKnown RBP4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 HAPLN4Q86UW8 402 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 CIARTQ8N365 385 aaPredicted RBP4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 PCDH20Q8N6Y1 951 aaKnown RBP4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 LRRC8CQ8TDW0 803 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 PRMT6Q96LA8 375 aaPredicted RBP4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 MTERF1Q99551 399 aaKnown RBP4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 CMKLR1Q99788 373 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 SLC6A13Q9NSD5 602 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 CYP46A1Q9Y6A2 500 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 CEPT1Q9Y6K0 416 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 ZDBF2Q9HCK1 2354 aa4.47□□□□□ -1.69
SMARCC1-207ENST00000485833 PTPRFP10586 1907 aa4.46□□□□□ -1.69
SMARCC1-207ENST00000485833 KIF26BQ2KJY2 2108 aa4.46□□□□□ -1.69
SMARCC1-207ENST00000485833 MED23Q9ULK4 1368 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 PYGLP06737 847 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 MYOD1P15172 320 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 FOSL2P15408 326 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 CORO1AP31146 461 aaKnown RBP4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 FMO5P49326 533 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 CSNK2A1P68400 391 aaPredicted RBP4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 PDE1BQ01064 536 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 DRAP1Q14919 205 aaPredicted RBP4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 TAF7Q15545 349 aaPredicted RBP4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 LRRC26Q2I0M4 334 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 FRG2Q64ET8 278 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 KRTAP5-11Q6L8G4 156 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 DUS1LQ6P1R4 473 aaKnown RBP4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 C19orf48Q6RUI8 117 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 ESX1Q8N693 406 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 METTL27Q8N6F8 245 aaPredicted RBP4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 CSNK2A3Q8NEV1 391 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 ZKSCAN4Q969J2 545 aaPredicted RBP4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 SAAL1Q96ER3 474 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 PGLYRP2Q96PD5 576 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 NR1H4Q96RI1 486 aaPredicted RBP4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 TMEM47Q9BQJ4 181 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 TMEM39BQ9GZU3 492 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 FBRSL1Q9HCM7 1045 aaKnown RBP4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 ZNF334Q9HCZ1 680 aaPredicted RBP4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 MYH3P11055 1940 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 PHIPQ8WWQ0 1821 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 USP34Q70CQ2 3546 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 CACNA1GO43497 2377 aa4.46□□□□□ -1.7
SMARCC1-207ENST00000485833 VCYO14598 125 aa4.45□□□□□ -1.7
SMARCC1-207ENST00000485833 CAPN9O14815 690 aa4.45□□□□□ -1.7
SMARCC1-207ENST00000485833 SLC22A3O75751 556 aa4.45□□□□□ -1.7
SMARCC1-207ENST00000485833 HSPA5P11021 654 aaKnown RBP4.45□□□□□ -1.7
SMARCC1-207ENST00000485833 CD53P19397 219 aa4.45□□□□□ -1.7
SMARCC1-207ENST00000485833 FASLGP48023 281 aa4.45□□□□□ -1.7
SMARCC1-207ENST00000485833 GLIPR1P48060 266 aa4.45□□□□□ -1.7
SMARCC1-207ENST00000485833 EIF3BP55884 814 aaKnown RBP4.45□□□□□ -1.7
SMARCC1-207ENST00000485833 FOXM1Q08050 763 aa4.45□□□□□ -1.7
SMARCC1-207ENST00000485833 DMP1Q13316 513 aaPredicted RBP4.45□□□□□ -1.7
SMARCC1-207ENST00000485833 SHHQ15465 462 aa4.45□□□□□ -1.7
SMARCC1-207ENST00000485833 MRGPRG-AS1Q2M3A8 158 aa4.45□□□□□ -1.7
SMARCC1-207ENST00000485833 TMEM95Q3KNT9 176 aa4.45□□□□□ -1.7
SMARCC1-207ENST00000485833 GPATCH4Q5T3I0 446 aaKnown RBP4.45□□□□□ -1.7
SMARCC1-207ENST00000485833 ZNF280DQ6N043 979 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms