RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 SMYD2Q9NRG4 433 aa19.56■□□□□ 0.72
COL6A2-208ENST00000485591 TBC1D29Q9UFV1 150 aa19.56■□□□□ 0.72
COL6A2-208ENST00000485591 COMMD10Q9Y6G5 202 aa19.56■□□□□ 0.72
COL6A2-208ENST00000485591 B4DGG1 531 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 HAUS5O94927 633 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 SDHBP21912 280 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 IDSP22304 550 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 GABRB3P28472 473 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 PROX2Q3B8N5 592 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 AGAP9Q5VTM2 703 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 METRNLQ641Q3 311 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 CNSTQ6PJW8 725 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 WASH2PQ6VEQ5 465 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 ARL10Q8N8L6 244 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 LKAAEAR1Q8TD35 194 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 FBF1Q8TES7 1133 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 ZDHHC1Q8WTX9 485 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 APOLD1Q96LR9 279 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 CAMK1GQ96NX5 476 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 FUT8Q9BYC5 575 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 TXLNGYQ9BZA5 131 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 COG4Q9H9E3 785 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 WASH6PQ9NQA3 447 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 NCKIPSDQ9NZQ3 722 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 FTSJ1Q9UET6 329 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 DNAH14Q0VDD8 3507 aa19.55■□□□□ 0.72
COL6A2-208ENST00000485591 PTPRZ1P23471 2315 aaPredicted RBP19.54■□□□□ 0.72
COL6A2-208ENST00000485591 IQCF5A8MTL0 148 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 LIN7AO14910 233 aaPredicted RBP19.54■□□□□ 0.72
COL6A2-208ENST00000485591 NOBOXO60393 691 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 SNX2O60749 519 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 EML2O95834 649 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 AHSGP02765 367 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 F3P13726 295 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 SLC2A4P14672 509 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 CSRP1P21291 193 aaKnown RBP19.54■□□□□ 0.72
COL6A2-208ENST00000485591 MCM3P25205 808 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 CD151P48509 253 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 NAB1Q13506 487 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 RSPO4Q2I0M5 234 aaPredicted RBP19.54■□□□□ 0.72
COL6A2-208ENST00000485591 KBTBD12Q3ZCT8 623 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 UBAP2Q5T6F2 1119 aaKnown RBP19.54■□□□□ 0.72
COL6A2-208ENST00000485591 TRMT10CQ7L0Y3 403 aaKnown RBP19.54■□□□□ 0.72
COL6A2-208ENST00000485591 SLC35F3Q8IY50 421 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 NAGSQ8N159 534 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 KRT222Q8N1A0 295 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 KYQ8NBH2 561 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 GPR156Q8NFN8 814 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 ELMO1Q92556 727 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 GLMNQ92990 594 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 CDC6Q99741 560 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 CCDC68Q9H2F9 335 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 SIRPGQ9P1W8 387 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 FAM8A1Q9UBU6 413 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 ACSL5Q9ULC5 683 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 CORO1CQ9ULV4 474 aaPredicted RBP19.54■□□□□ 0.72
COL6A2-208ENST00000485591 PSAT1Q9Y617 370 aa19.54■□□□□ 0.72
COL6A2-208ENST00000485591 LY6G6EA0A0G2JKS1 128 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 PDZK1P1A8MUH7 402 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 CXorf49A8MYA2 514 aaPredicted RBP19.53■□□□□ 0.72
COL6A2-208ENST00000485591 NIPSNAP2O75323 286 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 TRIM16O95361 564 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 ACSL3O95573 720 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 LDOC1O95751 146 aaPredicted RBP19.53■□□□□ 0.72
COL6A2-208ENST00000485591 ITGB6P18564 788 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 HOXD11P31277 338 aaPredicted RBP19.53■□□□□ 0.72
COL6A2-208ENST00000485591 CCR7P32248 378 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 PMS2P54278 862 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 ILF2Q12905 390 aaKnown RBP19.53■□□□□ 0.72
COL6A2-208ENST00000485591 RPA4Q13156 261 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 ZNF549Q6P9A3 640 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 ABRAXAS1Q6UWZ7 409 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 STRA8Q7Z7C7 330 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 C17orf82Q86X59 251 aaPredicted RBP19.53■□□□□ 0.72
COL6A2-208ENST00000485591 CFAP206Q8IYR0 622 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 LILRA3Q8N6C8 439 aaPredicted RBP19.53■□□□□ 0.72
COL6A2-208ENST00000485591 KCNJ9Q92806 393 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 CNDP2Q96KP4 475 aaKnown RBP19.53■□□□□ 0.72
COL6A2-208ENST00000485591 RTKNQ9BST9 563 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 MCMBPQ9BTE3 642 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 AARSD1Q9BTE6 412 aaKnown RBP19.53■□□□□ 0.72
COL6A2-208ENST00000485591 SLC32A1Q9H598 525 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 ACSS3Q9H6R3 686 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 PRDM8Q9NQV8 689 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 U3KQA8 63 aa19.53■□□□□ 0.72
COL6A2-208ENST00000485591 PIEZO1Q92508 2521 aa19.52■□□□□ 0.72
COL6A2-208ENST00000485591 SLC5A10A0PJK1 596 aa19.52■□□□□ 0.72
COL6A2-208ENST00000485591 OR5K4A6NMS3 321 aa19.52■□□□□ 0.72
COL6A2-208ENST00000485591 KPNA5O15131 536 aa19.52■□□□□ 0.72
COL6A2-208ENST00000485591 PIAS1O75925 651 aa19.52■□□□□ 0.72
COL6A2-208ENST00000485591 ABHD2P08910 425 aa19.52■□□□□ 0.72
COL6A2-208ENST00000485591 RPL10P27635 214 aaKnown RBP19.52■□□□□ 0.72
COL6A2-208ENST00000485591 AOAHP28039 575 aa19.52■□□□□ 0.72
COL6A2-208ENST00000485591 RPIAP49247 311 aa19.52■□□□□ 0.72
COL6A2-208ENST00000485591 BOP1Q14137 746 aaKnown RBP19.52■□□□□ 0.72
COL6A2-208ENST00000485591 NR0B2Q15466 257 aa19.52■□□□□ 0.72
COL6A2-208ENST00000485591 SEPT7Q16181 437 aaKnown RBP19.52■□□□□ 0.72
COL6A2-208ENST00000485591 SYTL3Q4VX76 610 aa19.52■□□□□ 0.72
COL6A2-208ENST00000485591 C14orf28Q4W4Y0 310 aa19.52■□□□□ 0.72
COL6A2-208ENST00000485591 IYDQ6PHW0 289 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms