RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 IGHV5-51A0A0C4DH38 117 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 C5orf60A6NFR6 353 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 C2orf81A6NN90 581 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 C21orf140B9A014 251 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 AGTP01019 485 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 RBL1P28749 1068 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 MARCKSL1P49006 195 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 NFE2L1Q14494 772 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 CCDC50Q8IVM0 306 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 KLHDC8BQ8IXV7 354 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 D2HGDHQ8N465 521 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 PPP1R2P1Q96PQ5 205 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 INSM2Q96T92 566 aaPredicted RBP11.2□□□□□ -0.62
SCFD1-206ENST00000484733 FERMT1Q9BQL6 677 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 FSD1LQ9BXM9 530 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 GOLPH3Q9H4A6 298 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 RARRES3Q9UL19 164 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 POLHQ9Y253 713 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 AAR2Q9Y312 384 aaKnown RBP11.2□□□□□ -0.62
SCFD1-206ENST00000484733 PCDHA3Q9Y5H8 950 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 MYO18BQ8IUG5 2567 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 OR5K3A6NET4 321 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 TLCD2A6NGC4 264 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 H7C0C1 242 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 CTNNA1P35221 906 aaKnown RBP11.2□□□□□ -0.62
SCFD1-206ENST00000484733 ATP5OP48047 213 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 XIAPP98170 497 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 PDE1BQ01064 536 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 MSLNQ13421 630 aaPredicted RBP11.2□□□□□ -0.62
SCFD1-206ENST00000484733 LLGL1Q15334 1064 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 SKIDA1Q1XH10 827 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 LACTB2Q53H82 288 aaPredicted RBP11.2□□□□□ -0.62
SCFD1-206ENST00000484733 OR8K5Q8NH50 307 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 SEC14L1Q92503 715 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 KRT35Q92764 455 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 HAUS1Q96CS2 278 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 ABHD17AQ96GS6 310 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 FICDQ9BVA6 458 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 EPN3Q9H201 632 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 LHX9Q9NQ69 397 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 LATS2Q9NRM7 1088 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 FEZ2Q9UHY8 353 aaPredicted RBP11.2□□□□□ -0.62
SCFD1-206ENST00000484733 PSMD13Q9UNM6 376 aa11.2□□□□□ -0.62
SCFD1-206ENST00000484733 OR2AG2A6NM03 316 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 BUD23O43709 281 aaKnown RBP11.19□□□□□ -0.62
SCFD1-206ENST00000484733 CREG1O75629 220 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 SRP72O76094 671 aaKnown RBP11.19□□□□□ -0.62
SCFD1-206ENST00000484733 PRAMEF1O95521 474 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 FOLR1P15328 257 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 CTNNA2P26232 953 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 NDUFS1P28331 727 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 CYLC1P35663 651 aaPredicted RBP11.19□□□□□ -0.62
SCFD1-206ENST00000484733 FOXK1P85037 733 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 TUBB3Q13509 450 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 DNASE1L3Q13609 305 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 PRPSAP1Q14558 356 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 SPA17Q15506 151 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 ATP1A1-AS1Q5TC04 95 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 CAPRIN2Q6IMN6 1127 aaKnown RBP11.19□□□□□ -0.62
SCFD1-206ENST00000484733 CDKL3Q8IVW4 592 aaPredicted RBP11.19□□□□□ -0.62
SCFD1-206ENST00000484733 OR4K2Q8NGD2 314 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 HEXDCQ8WVB3 486 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 ULK4Q96C45 1275 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 MAP3K3Q99759 626 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 CCM2Q9BSQ5 444 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 HEMGNQ9BXL5 484 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 GPR87Q9BY21 358 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 WWP1Q9H0M0 922 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 KIR3DX1Q9H7L2 352 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 ARNT2Q9HBZ2 717 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 ARL5AQ9Y689 179 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 C17orf113A0A1B0GUU1 675 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 BTNL10A8MVZ5 291 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 F5H423 210 aaPredicted RBP11.19□□□□□ -0.62
SCFD1-206ENST00000484733 GPR39O43194 453 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 SGTAO43765 313 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 AKT1P31749 480 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 PPP1CAP62136 330 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 HSD11B2P80365 405 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 PTPRCAPQ14761 206 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 ANKRD20A2Q5SQ80 823 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 FNBP1LQ5T0N5 605 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 ANKRD20A1Q5TYW2 823 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 ANKRD20A3Q5VUR7 823 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 TCTN3Q6NUS6 607 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 OOSP2Q86WS3 158 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 APLFQ8IW19 511 aaPredicted RBP11.19□□□□□ -0.62
SCFD1-206ENST00000484733 RNF214Q8ND24 703 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 CT55Q8WUE5 264 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 ELMO2Q96JJ3 720 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 ASB8Q9H765 288 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 LNPEPQ9UIQ6 1025 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 HEBP2Q9Y5Z4 205 aa11.19□□□□□ -0.62
SCFD1-206ENST00000484733 UBA6A0AVT1 1052 aaPredicted RBP11.18□□□□□ -0.62
SCFD1-206ENST00000484733 PJA2O43164 708 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 CRTAMO95727 393 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 FURINP09958 794 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 PMS2P54278 862 aa11.18□□□□□ -0.62
SCFD1-206ENST00000484733 OTUD4Q01804 1114 aaKnown RBP11.18□□□□□ -0.62
SCFD1-206ENST00000484733 KLRB1Q12918 225 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms