RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 KLHL35Q6PF15 583 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 FAM83HQ6ZRV2 1179 aaPredicted RBP10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 IRF2BP2Q7Z5L9 587 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 TRAPPC5Q8IUR0 188 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 TMEM151BQ8IW70 566 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 GALNT16Q8N428 558 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 SPDYE1Q8NFV5 336 aaPredicted RBP10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 OR8K5Q8NH50 307 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 OR1L3Q8NH93 324 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 SOHLH2Q9NX45 425 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 NFKBIL1Q9UBC1 381 aaPredicted RBP10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 BTRCQ9Y297 605 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 CFAP20Q9Y6A4 193 aaKnown RBP10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 FER1L5A0AVI2 2057 aa10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 SLC9B1P1A6NJY1 282 aa10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 KLF7O75840 302 aaPredicted RBP10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 ALPPP05187 535 aa10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 FERP16591 822 aa10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 BPIP17213 487 aa10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 FOXL2P58012 376 aa10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 TMEM115Q12893 351 aaPredicted RBP10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 ZXDCQ2QGD7 858 aaPredicted RBP10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 DCAF10Q5QP82 559 aa10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 TMTC4Q5T4D3 741 aa10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 NCBP2-AS2Q69YL0 99 aa10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 PDPK2PQ6A1A2 396 aa10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 TMC3Q7Z5M5 1100 aa10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 RAB43Q86YS6 212 aa10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 LRRC49Q8IUZ0 686 aa10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 LURAP1Q96LR2 239 aa10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 TRIB3Q96RU7 358 aa10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 CLSTN2Q9H4D0 955 aa10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 ACTR5Q9H9F9 607 aaPredicted RBP10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 AGPAT4Q9NRZ5 378 aa10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 IMP3Q9NV31 184 aaKnown RBP10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 MYO1AQ9UBC5 1043 aa10.59□□□□□ -0.71
SMARCC1-205ENST00000483847 CCDC88CQ9P219 2028 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 ZGRF1Q86YA3 2104 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 MED13LQ71F56 2210 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 OR6C74A6NCV1 312 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 AURKAO14965 403 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 LDB2O43679 373 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 FTLP02792 175 aaPredicted RBP10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 MTHFD1P11586 935 aaKnown RBP10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 VCLP18206 1134 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 CYP2A7P20853 494 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 CCNCP24863 283 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 CTSCP53634 463 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 UBE2HP62256 183 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 SLC25A11Q02978 314 aaKnown RBP10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 BECN1Q14457 450 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 NFE2L1Q14494 772 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 PAFAH1B3Q15102 231 aaKnown RBP10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 HIF1AQ16665 826 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 ATP13A5Q4VNC0 1218 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 ZNF385CQ66K41 422 aaPredicted RBP10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 FJX1Q86VR8 437 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 AMZ2Q86W34 360 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 OOSP2Q86WS3 158 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 ZADH2Q8N4Q0 377 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 CNTD1Q8N815 330 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 GRHL3Q8TE85 626 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 TSGA13Q96PP4 275 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 INSM2Q96T92 566 aaPredicted RBP10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 ADGRE3Q9BY15 652 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 FANCLQ9NW38 375 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 TMEM63CQ9P1W3 806 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 AMACRQ9UHK6 382 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 ITGB1BP2Q9UKP3 347 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 ZNF711Q9Y462 761 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 SPO11Q9Y5K1 396 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 SVILO95425 2214 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 SEC16AO15027 2179 aa10.58□□□□□ -0.72
SMARCC1-205ENST00000483847 LGALS16A8MUM7 142 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 TMEM150CB9EJG8 249 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 GPR39O43194 453 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 POP7O75817 140 aaKnown RBP10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 POLR2CP19387 275 aaPredicted RBP10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 ITGA3P26006 1051 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 UBXN1Q04323 297 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 GBE1Q04446 702 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 DMPKQ09013 629 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 XRCC4Q13426 336 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 KRT81Q14533 505 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 IFI16Q16666 785 aaKnown RBP10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 CCDC122Q5T0U0 273 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 TIGD7Q6NT04 549 aaPredicted RBP10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 RASGEF1AQ8N9B8 481 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 CLEC1AQ8NC01 280 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 GDAP1Q8TB36 358 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 ENOX1Q8TC92 643 aaKnown RBP10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 TEKT4Q8WW24 435 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 FATE1Q969F0 183 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 BTBD6Q96KE9 485 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 FER1L6-AS2Q96M78 137 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 VPS35Q96QK1 796 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 NRTNQ99748 197 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 CEP41Q9BYV8 373 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 GPR63Q9BZJ6 419 aa10.57□□□□□ -0.72
SMARCC1-205ENST00000483847 WWP1Q9H0M0 922 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms