RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 ZNF234Q14588 700 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 ZXDCQ2QGD7 858 aaPredicted RBP8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 HNRNPA1L2Q32P51 320 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 C11orf91Q3C1V1 193 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 HENMT1Q5T8I9 393 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 KANK2Q63ZY3 851 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 ANKS6Q68DC2 871 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 PARM1Q6UWI2 310 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 MBOAT1Q6ZNC8 495 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 TECPR1Q7Z6L1 1165 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 RAB44Q7Z6P3 723 aaPredicted RBP8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 SNX32Q86XE0 403 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 ULK2Q8IYT8 1036 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 ZBTB2Q8N680 514 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 CMTM5Q96DZ9 223 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 FAM129BQ96TA1 746 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 TTC1Q99614 292 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 KXD1Q9BQD3 176 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 WRAP53Q9BUR4 548 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 RIOK2Q9BVS4 552 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 TMEM245Q9H330 911 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 FAM83DQ9H4H8 585 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 AKTIPQ9H8T0 292 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 ZFP14Q9HCL3 533 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 SPATS2LQ9NUQ6 558 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 PPM1HQ9ULR3 514 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 BTRCQ9Y297 605 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 A0A1W2PQ67 120 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 RGSL1A5PLK6 1076 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 TBC1D3BA6NDS4 549 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 TMEM202A6NGA9 273 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 AZIN1O14977 448 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 TAPBPO15533 448 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 TM7SF2O76062 418 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 LINC00032P0C843 101 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 ZNF30P17039 623 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 GJA4P35212 333 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 IL12RB1P42701 662 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 ERVPABLB-1P60509 514 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 ST8SIA6P61647 398 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 HSPA14Q0VDF9 509 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 FNDC3BQ53EP0 1204 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 TCHHL1Q5QJ38 904 aaPredicted RBP8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 LYPLAL1Q5VWZ2 237 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 LIPIQ6XZB0 460 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 TMEM184AQ6ZMB5 413 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 PHYKPLQ8IUZ5 450 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 KIAA1958Q8N8K9 716 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 TERB1Q8NA31 727 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 OR9I1Q8NGQ6 314 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 ACTRT2Q8TDY3 377 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 WFIKKN2Q8TEU8 576 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 ZNF483Q8TF39 744 aaPredicted RBP8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 TWIST2Q8WVJ9 160 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 STON2Q8WXE9 905 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 ARRDC3Q96B67 414 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 SLC45A3Q96JT2 553 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 HGH1Q9BTY7 390 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 CLDND1Q9NY35 253 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 CLEC1BQ9P126 229 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 DKK3Q9UBP4 350 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 PACSIN3Q9UKS6 424 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 CDH7Q9ULB5 785 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 SLC8A2Q9UPR5 921 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 COQ6Q9Y2Z9 468 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 MYO15AQ9UKN7 3530 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 COL4A3Q01955 1670 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 OR2AG2A6NM03 316 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 K7ESM1 405 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 AIM2O14862 343 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 MAGEC1O60732 1142 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 SNX2O60749 519 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 ASLP04424 464 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 ATP1B2P14415 290 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 PAX7P23759 505 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 RAP1GDS1P52306 607 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 CUL3Q13618 768 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 RUNX3Q13761 415 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 GRB7Q14451 532 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 ATAT1Q5SQI0 421 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 CES5AQ6NT32 575 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 LETMD1Q6P1Q0 360 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 SCIMPQ6UWF3 145 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 DPPA4Q7L190 304 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 ADAMTSL2Q86TH1 951 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 DEFB107AQ8IZN7 70 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 LRIG1Q96JA1 1093 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 FAR2Q96K12 515 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 MMADHCQ9H3L0 296 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 LATS2Q9NRM7 1088 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 PKD2L2Q9NZM6 624 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 H0Y3Z8 333 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 OR7A17O14581 309 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 PDE5AO76074 875 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 ESRRBO95718 433 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 DGKAP23743 735 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 AOAHP28039 575 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 AKT1P31749 480 aa8.69□□□□□ -1.02
CDC42SE1-204ENST00000483763 SOX9P48436 509 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms