RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, human

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM54-206	ENST00000482771	LDLR	P01130	860 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	RAB40AL	P0C0E4	278 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	UGT1A6	P19224	532 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	UGT1A1	P22309	533 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	UGT1A4	P22310	534 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	ARCN1	P48444	511 aa	Known RBP	12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	VAV2	P52735	878 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	CTSC	P53634	463 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	GSDMD	P57764	484 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	PPID	Q08752	370 aa	Known RBP	12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	AP1B1	Q10567	949 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	RAPSN	Q13702	412 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	TMTC4	Q5T4D3	741 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	ZFYVE27	Q5T4F4	411 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	HGSNAT	Q68CP4	663 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	ARMC6	Q6NXE6	501 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	MED25	Q71SY5	747 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	HPS6	Q86YV9	775 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	ZBTB2	Q8N680	514 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	RASGEF1A	Q8N9B8	481 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	TMEM102	Q8N9M5	508 aa	Predicted RBP	12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	SPATA22	Q8NHS9	363 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	RAPGEF5	Q92565	580 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	FAF2	Q96CS3	445 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	CLIP3	Q96DZ5	547 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	PPM1M	Q96MI6	270 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	ZNF830	Q96NB3	372 aa	Predicted RBP	12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	NAP1L5	Q96NT1	182 aa	Predicted RBP	12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	RNF157	Q96PX1	679 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	VPS35	Q96QK1	796 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	INSM2	Q96T92	566 aa	Predicted RBP	12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	NLN	Q9BYT8	704 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	XPO4	Q9C0E2	1151 aa	Known RBP	12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	SLC25A51	Q9H1U9	297 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	UGT1A7	Q9HAW7	530 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	UGT1A10	Q9HAW8	530 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	UGT1A8	Q9HAW9	530 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	CBX8	Q9HC52	389 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	IL26	Q9NPH9	171 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	IMP3	Q9NV31	184 aa	Known RBP	12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	ASF1B	Q9NVP2	202 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	GPR83	Q9NYM4	423 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	HEY1	Q9Y5J3	304 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	CNTRL	Q7Z7A1	2325 aa		12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	ZNF106	Q9H2Y7	1883 aa	Known RBP	12.51	□□□□□ -0.41
TMEM54-206	ENST00000482771	DIDO1	Q9BTC0	2240 aa	Known RBP	12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	PMPCB	O75439	489 aa		12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	NDST3	O95803	873 aa		12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	MT-CYB	P00156	380 aa	Predicted RBP	12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	KDELR1	P24390	212 aa		12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	DMPK	Q09013	629 aa		12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	XRCC4	Q13426	336 aa		12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	NFE2L1	Q14494	772 aa		12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	B4GALNT4	Q76KP1	1039 aa		12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	SRRM1	Q8IYB3	904 aa	Known RBP	12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	DSEL	Q8IZU8	1212 aa		12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	GLIS1	Q8NBF1	620 aa		12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	CPT1B	Q92523	772 aa		12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	C5orf34	Q96MH7	638 aa		12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	LRFN5	Q96NI6	719 aa		12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	SRPK1	Q96SB4	655 aa	Known RBP	12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	SMAD5	Q99717	465 aa	Known RBP	12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	SOHLH2	Q9NX45	425 aa		12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	SLC5A6	Q9Y289	635 aa		12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771	BZW2	Q9Y6E2	419 aa	Known RBP	12.5	□□□□□ -0.41
TMEM54-206	ENST00000482771		A0A087X0T9	212 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	SLC9B1P1	A6NJY1	282 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	OR2AG2	A6NM03	316 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771		F5H423	210 aa	Predicted RBP	12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	GOLGA6L22	H0YM25	854 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	PROSC	O94903	275 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	CAPN1	P07384	714 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	FAM228B	P0C875	321 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	MTHFD1	P11586	935 aa	Known RBP	12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	POLR2C	P19387	275 aa	Predicted RBP	12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	PBLD	P30039	288 aa	Predicted RBP	12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	CA5A	P35218	305 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	HMGCL	P35914	325 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	KPNA2	P52292	529 aa	Known RBP	12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	RRAD	P55042	308 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	METRNL	Q641Q3	311 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	ALKBH5	Q6P6C2	394 aa	Known RBP	12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	OOSP2	Q86WS3	158 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	OR4E2	Q8NGC2	313 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	TADA1	Q96BN2	335 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	SGSM3	Q96HU1	749 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	TLR10	Q9BXR5	811 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	WWP1	Q9H0M0	922 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	GLOD4	Q9HC38	313 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	LATS2	Q9NRM7	1088 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	UBP1	Q9NZI7	540 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	PIKFYVE	Q9Y2I7	2098 aa		12.49	□□□□□ -0.41
TMEM54-206	ENST00000482771	ANKUB1	A6NFN9	424 aa		12.48	□□□□□ -0.41
TMEM54-206	ENST00000482771	RORA	P35398	523 aa		12.48	□□□□□ -0.41
TMEM54-206	ENST00000482771	ABR	Q12979	859 aa		12.48	□□□□□ -0.41
TMEM54-206	ENST00000482771	ATP1A4	Q13733	1029 aa		12.48	□□□□□ -0.41
TMEM54-206	ENST00000482771	NR1I3	Q14994	352 aa		12.48	□□□□□ -0.41
TMEM54-206	ENST00000482771	NOMO1	Q15155	1222 aa		12.48	□□□□□ -0.41
TMEM54-206	ENST00000482771	PPP2R5E	Q16537	467 aa		12.48	□□□□□ -0.41

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