RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 KIF18AQ8NI77 898 aa20.09■□□□□ 0.81
VARS-224ENST00000479051 SIGLEC10Q96LC7 697 aa20.09■□□□□ 0.81
VARS-224ENST00000479051 ERP44Q9BS26 406 aa20.09■□□□□ 0.81
VARS-224ENST00000479051 ZMYND15Q9H091 742 aa20.09■□□□□ 0.81
VARS-224ENST00000479051 RAB17Q9H0T7 212 aa20.09■□□□□ 0.81
VARS-224ENST00000479051 UTP11Q9Y3A2 253 aaKnown RBP20.09■□□□□ 0.81
VARS-224ENST00000479051 A0A1W2PQM1 296 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 D6RAR5 112 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 PRMT5O14744 637 aaPredicted RBP20.08■□□□□ 0.81
VARS-224ENST00000479051 RAD51CO43502 376 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 TTC4O95801 387 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 BRAFP15056 766 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 PGAM1P18669 254 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 ARL4CP56559 192 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 UBE2IP63279 158 aaKnown RBP20.08■□□□□ 0.81
VARS-224ENST00000479051 THOC5Q13769 683 aaKnown RBP20.08■□□□□ 0.81
VARS-224ENST00000479051 HIF1AQ16665 826 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 BBS9Q3SYG4 887 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 AMZ1Q400G9 498 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 LRRC6Q86X45 466 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 MNS1Q8NEH6 495 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 GABPB2Q8TAK5 448 aaPredicted RBP20.08■□□□□ 0.81
VARS-224ENST00000479051 TMEM74Q96NL1 305 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 TCF12Q99081 682 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 DPYSL5Q9BPU6 564 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 EPB41L1Q9H4G0 881 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 UCK1Q9HA47 277 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 SCHIP1Q9P0W5 487 aaPredicted RBP20.08■□□□□ 0.81
VARS-224ENST00000479051 MARCH4Q9P2E8 410 aaPredicted RBP20.08■□□□□ 0.81
VARS-224ENST00000479051 PSMD13Q9UNM6 376 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 VPS9D1Q9Y2B5 631 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 SNX24Q9Y343 169 aa20.08■□□□□ 0.81
VARS-224ENST00000479051 OR52A4PA6NMU1 304 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 LIN7AO14910 233 aaPredicted RBP20.07■□□□□ 0.8
VARS-224ENST00000479051 DUX1O43812 170 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 OR1I1O60431 355 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 CPNE6O95741 557 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 OGNP20774 298 aaKnown RBP20.07■□□□□ 0.8
VARS-224ENST00000479051 ARNTP27540 789 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 SLC19A1P41440 591 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 RPL21P46778 160 aaKnown RBP20.07■□□□□ 0.8
VARS-224ENST00000479051 EPHA4P54764 986 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 PLOD1Q02809 727 aaPredicted RBP20.07■□□□□ 0.8
VARS-224ENST00000479051 DHX9Q08211 1270 aaKnown RBP20.07■□□□□ 0.8
VARS-224ENST00000479051 RPA4Q13156 261 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 SEMA3AQ14563 771 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 LONRF1Q17RB8 773 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 ISXQ2M1V0 245 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 SYTL3Q4VX76 610 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 NEPROQ6NW34 567 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 PIM3Q86V86 326 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 GPR150Q8NGU9 434 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 CALML6Q8TD86 181 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 LRRC39Q96DD0 335 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 EBNA1BP2Q99848 306 aaKnown RBP20.07■□□□□ 0.8
VARS-224ENST00000479051 STRADBQ9C0K7 418 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 WWP1Q9H0M0 922 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 COG4Q9H9E3 785 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 WHRNQ9P202 907 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 ZNF624Q9P2J8 865 aaPredicted RBP20.07■□□□□ 0.8
VARS-224ENST00000479051 GNPTGQ9UJJ9 305 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 WDR37Q9Y2I8 494 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 PRSS21Q9Y6M0 314 aa20.07■□□□□ 0.8
VARS-224ENST00000479051 IGHV1OR21-1A0A087WYE8 117 aa20.06■□□□□ 0.8
VARS-224ENST00000479051 LILRA5A6NI73 299 aa20.06■□□□□ 0.8
VARS-224ENST00000479051 IFRD1O00458 451 aaPredicted RBP20.06■□□□□ 0.8
VARS-224ENST00000479051 B4GAT1O43505 415 aa20.06■□□□□ 0.8
VARS-224ENST00000479051 ARCN1P48444 511 aaKnown RBP20.06■□□□□ 0.8
VARS-224ENST00000479051 CLCA4Q14CN2 919 aa20.06■□□□□ 0.8
VARS-224ENST00000479051 RPE65Q16518 533 aa20.06■□□□□ 0.8
VARS-224ENST00000479051 PTRHD1Q6GMV3 140 aaKnown RBP20.06■□□□□ 0.8
VARS-224ENST00000479051 TMEM26Q6ZUK4 368 aa20.06■□□□□ 0.8
VARS-224ENST00000479051 LDB1Q86U70 411 aaPredicted RBP20.06■□□□□ 0.8
VARS-224ENST00000479051 MARCH9Q86YJ5 346 aa20.06■□□□□ 0.8
VARS-224ENST00000479051 LMNTD2Q8IXW0 634 aa20.06■□□□□ 0.8
VARS-224ENST00000479051 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.06■□□□□ 0.81e-6■■■■■ 38.1
VARS-224ENST00000479051 ELMO1Q92556 727 aa20.06■□□□□ 0.8
VARS-224ENST00000479051 NXPE2Q96DL1 559 aa20.06■□□□□ 0.8
VARS-224ENST00000479051 C12orf66Q96MD2 445 aa20.06■□□□□ 0.8
VARS-224ENST00000479051 FCRL3Q96P31 734 aaPredicted RBP20.06■□□□□ 0.8
VARS-224ENST00000479051 DPH5Q9H2P9 285 aa20.06■□□□□ 0.8
VARS-224ENST00000479051 EPB41L5Q9HCM4 733 aa20.06■□□□□ 0.8
VARS-224ENST00000479051 C20orf96Q9NUD7 363 aaPredicted RBP20.06■□□□□ 0.8
VARS-224ENST00000479051 IMP3Q9NV31 184 aaKnown RBP20.06■□□□□ 0.8
VARS-224ENST00000479051 HEBP2Q9Y5Z4 205 aa20.06■□□□□ 0.8
VARS-224ENST00000479051 FAM169AQ9Y6X4 670 aa20.06■□□□□ 0.8
VARS-224ENST00000479051 KNTC1P50748 2209 aa20.05■□□□□ 0.8
VARS-224ENST00000479051 ZCWPW2A0A1B0GU75 182 aa20.05■□□□□ 0.8
VARS-224ENST00000479051 UBA6A0AVT1 1052 aaPredicted RBP20.05■□□□□ 0.8
VARS-224ENST00000479051 GOLGA8KD6RF30 607 aa20.05■□□□□ 0.8
VARS-224ENST00000479051 GOLGA8TH3BQL2 631 aa20.05■□□□□ 0.8
VARS-224ENST00000479051 MTHFD1P11586 935 aaKnown RBP20.05■□□□□ 0.8
VARS-224ENST00000479051 INHBCP55103 352 aa20.05■□□□□ 0.8
VARS-224ENST00000479051 MRPS25P82663 173 aaKnown RBP20.05■□□□□ 0.8
VARS-224ENST00000479051 KRT33BQ14525 404 aa20.05■□□□□ 0.8
VARS-224ENST00000479051 TYSND1Q2T9J0 566 aa20.05■□□□□ 0.8
VARS-224ENST00000479051 SPANXN3Q5MJ09 141 aa20.05■□□□□ 0.8
VARS-224ENST00000479051 ZNF470Q6ECI4 717 aa20.05■□□□□ 0.8
VARS-224ENST00000479051 C8orf74Q6P047 294 aa20.05■□□□□ 0.8
VARS-224ENST00000479051 ZNF761Q86XN6 746 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms