RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 PACS1Q6VY07 963 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 NAPRTQ6XQN6 538 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 CERS6Q6ZMG9 384 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 SPRED1Q7Z699 444 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 SLC9B2Q86UD5 537 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 ANKMY2Q8IV38 441 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 CFAP206Q8IYR0 622 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 OR6C4Q8NGE1 309 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 OR2L2Q8NH16 312 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 HM13Q8TCT9 377 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 CXorf40BQ96DE9 158 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 SIGLEC10Q96LC7 697 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 SLC38A3Q99624 504 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 ERP44Q9BS26 406 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 CCM2Q9BSQ5 444 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 WWP1Q9H0M0 922 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 RAB17Q9H0T7 212 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 C20orf96Q9NUD7 363 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 IMP3Q9NV31 184 aaKnown RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 CPNE7Q9UBL6 633 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 ATXN7L1Q9ULK2 861 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-215ENST00000478531 CLCA2Q9UQC9 943 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 WDR37Q9Y2I8 494 aa6.77□□□□□ -1.33
BRCA1-215ENST00000478531 KIR2DS5A0A0G2JLQ3 304 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 PRAMEF33A0A0G2JMD5 474 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 A0A0G2JNG1 304 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 ZCWPW2A0A1B0GU75 182 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 ESYT3A0FGR9 886 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 MAGEB16A2A368 324 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 CTAGE15A4D2H0 777 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 KIR2DS3K7RE56 304 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 NDUFS3O75489 264 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 USP1O94782 785 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 MT-CO3P00414 261 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 VIPP01282 170 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 FTH1P02794 183 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 OR56A5P0C7T3 313 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 CTAGE8P0CG41 777 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 CDK4P11802 303 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 ELK3P41970 407 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 ARCN1P48444 511 aaKnown RBP6.76□□□□□ -1.33
BRCA1-215ENST00000478531 DMPKQ09013 629 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 PDIA2Q13087 525 aaKnown RBP6.76□□□□□ -1.33
BRCA1-215ENST00000478531 THOC5Q13769 683 aaKnown RBP6.76□□□□□ -1.33
BRCA1-215ENST00000478531 KIR2DS5Q14953 304 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 CLCA4Q14CN2 919 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 LONRF1Q17RB8 773 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 NKAIN2Q5VXU1 208 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 PTRHD1Q6GMV3 140 aaKnown RBP6.76□□□□□ -1.33
BRCA1-215ENST00000478531 NEPROQ6NW34 567 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 DUS1LQ6P1R4 473 aaKnown RBP6.76□□□□□ -1.33
BRCA1-215ENST00000478531 RBM44Q6ZP01 1051 aaKnown RBP6.76□□□□□ -1.33
BRCA1-215ENST00000478531 CAPN12Q6ZSI9 719 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 SDCCAG8Q86SQ7 713 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-215ENST00000478531 TMEM135Q86UB9 458 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 CTAGE6Q86UF2 777 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 C17orf82Q86X59 251 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-215ENST00000478531 IGDCC3Q8IVU1 814 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 CTAGE4Q8IX94 777 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 UNC5BQ8IZJ1 945 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.76□□□□□ -1.33
BRCA1-215ENST00000478531 NOA1Q8NC60 698 aaKnown RBP6.76□□□□□ -1.33
BRCA1-215ENST00000478531 BBOF1Q8ND07 529 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 MNS1Q8NEH6 495 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 ELMO1Q92556 727 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 FAM136AQ96C01 138 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 AHCYL2Q96HN2 611 aaKnown RBP6.76□□□□□ -1.33
BRCA1-215ENST00000478531 SGSM3Q96HU1 749 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 GFM1Q96RP9 751 aaKnown RBP6.76□□□□□ -1.33
BRCA1-215ENST00000478531 EBNA1BP2Q99848 306 aaKnown RBP6.76□□□□□ -1.33
BRCA1-215ENST00000478531 FOXP3Q9BZS1 431 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 COG4Q9H9E3 785 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 RDH14Q9HBH5 336 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 SARS2Q9NP81 518 aaKnown RBP6.76□□□□□ -1.33
BRCA1-215ENST00000478531 PPANQ9NQ55 473 aaKnown RBP6.76□□□□□ -1.33
BRCA1-215ENST00000478531 KCNK4Q9NYG8 393 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 GNPTGQ9UJJ9 305 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 WASF3Q9UPY6 502 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 DNMT3AQ9Y6K1 912 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-215ENST00000478531 ANKRD12Q6UB98 2062 aa6.76□□□□□ -1.33
BRCA1-215ENST00000478531 A0A1W2PQM1 296 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 PRR19A6NJB7 356 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 OR5K4A6NMS3 321 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 IQCF5A8MTL0 148 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 D6RAR5 112 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 SMAPO00193 183 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 QSOX1O00391 747 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 PRMT5O14744 637 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 NDC80O14777 642 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 PFDN6O15212 129 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 TP73O15350 636 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 KCNJ13O60928 360 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 CSO75390 466 aaKnown RBP6.75□□□□□ -1.33
BRCA1-215ENST00000478531 AP2A2O94973 939 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 ERVK-10P10266 1014 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 FMO4P31512 558 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 SLC1A2P43004 574 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 FASLGP48023 281 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 PLTPP55058 493 aa6.75□□□□□ -1.33
BRCA1-215ENST00000478531 UBE2IP63279 158 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms