RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 MC4RP32245 332 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 SLC19A1P41440 591 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 GRIA1P42261 906 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 KCNJ1P48048 391 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 CDKN1CP49918 316 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-221ENST00000477561 CLCNKAP51800 687 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 ZNF140P52738 457 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-221ENST00000477561 LIMK2P53671 638 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 VSNL1P62760 191 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 PDE1BQ01064 536 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 SLC7A5Q01650 507 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 EIF3IQ13347 325 aaKnown RBP8.13□□□□□ -1.11
HDAC6-221ENST00000477561 NFE2L1Q14494 772 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 KIR2DS5Q14953 304 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 CLCA4Q14CN2 919 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 PPP1R7Q15435 360 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 KIF26BQ2KJY2 2108 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 P3H1Q32P28 736 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 CCDC38Q502W7 563 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 ZRANB3Q5FWF4 1079 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 TMEM71Q6P5X7 295 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 IGF2-ASQ6U949 168 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 FAM83HQ6ZRV2 1179 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-221ENST00000477561 GSTA5Q7RTV2 222 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 PDZD3Q86UT5 571 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 AMZ2Q86W34 360 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 TRIM48Q8IWZ4 208 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 CCDC89Q8N998 374 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 DNAAF3Q8N9W5 541 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 BBOF1Q8ND07 529 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 OR10G6Q8NH81 332 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 DTX3LQ8TDB6 740 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 KCNE4Q8WWG9 221 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 USP7Q93009 1102 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 SH3KBP1Q96B97 665 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 RTP4Q96DX8 246 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 CMKLR1Q99788 373 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 ERP44Q9BS26 406 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 MFRPQ9BY79 579 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 FAM129AQ9BZQ8 928 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 ZCCHC2Q9C0B9 1178 aaKnown RBP8.13□□□□□ -1.11
HDAC6-221ENST00000477561 STN1Q9H668 368 aaKnown RBP8.13□□□□□ -1.11
HDAC6-221ENST00000477561 RAB6BQ9NRW1 208 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 DMGDHQ9UI17 866 aaKnown RBP8.13□□□□□ -1.11
HDAC6-221ENST00000477561 CRLS1Q9UJA2 301 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 ACACAQ13085 2346 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 ADAMTS20P59510 1910 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 OR51F1A6NGY5 319 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 PRR19A6NJB7 356 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 DUX1O43812 170 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 PRAMEF10O60809 474 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 POLBP06746 335 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 ITGA2BP08514 1039 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 VCLP18206 1134 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 XRCC1P18887 633 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-221ENST00000477561 ITGALP20701 1170 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 RPL22P35268 128 aaKnown RBP8.12□□□□□ -1.11
HDAC6-221ENST00000477561 HADHAP40939 763 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 PTGIRP43119 386 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 ARSDP51689 593 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 UBE2IP63279 158 aaKnown RBP8.12□□□□□ -1.11
HDAC6-221ENST00000477561 CXADRP78310 365 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 GPLD1P80108 840 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 MRPS25P82663 173 aaKnown RBP8.12□□□□□ -1.11
HDAC6-221ENST00000477561 TLE3Q04726 772 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 PTK6Q13882 451 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 TGIF1Q15583 401 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 TTC27Q6P3X3 843 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 FBXO38Q6PIJ6 1188 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 ABRAXAS1Q6UWZ7 409 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 PPP1R21Q6ZMI0 780 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 TAS2R42Q7RTR8 314 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 SNX20Q7Z614 316 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 LINC00523Q86TU6 105 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 ZFAND4Q86XD8 727 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 OR4D9Q8NGE8 314 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 JPH3Q8WXH2 748 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-221ENST00000477561 SEC14L1Q92503 715 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 PMEPA1Q969W9 287 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 CXorf40BQ96DE9 158 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 DCUN1D1Q96GG9 259 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 CDKN2AIPNLQ96HQ2 116 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-221ENST00000477561 CPNE5Q9HCH3 593 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 NLE1Q9NVX2 485 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-221ENST00000477561 SMOXQ9NWM0 555 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 OCIAD1Q9NX40 245 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 FOXJ2Q9P0K8 574 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 AKAP7Q9P0M2 348 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-221ENST00000477561 CFAP20Q9Y6A4 193 aaKnown RBP8.12□□□□□ -1.11
HDAC6-221ENST00000477561 SLC30A1Q9Y6M5 507 aa8.12□□□□□ -1.11
HDAC6-221ENST00000477561 UNC13CQ8NB66 2214 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 EFCAB7A8K855 629 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 AGAP14A8MT82 685 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 C9orf172C9J069 976 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 SGTAO43765 313 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 UBXN7O94888 489 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 APRTP07741 180 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 THRAP10827 490 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 RALBP11234 206 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms