RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 USP46P62068 366 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 DLG1Q12959 904 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 FAM174BQ3ZCQ3 159 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 CYP20A1Q6UW02 462 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 HID1Q8IV36 788 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 AHI1Q8N157 1196 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 OLFM1Q99784 485 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 ROGDIQ9GZN7 287 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 SELENONQ9NZV5 590 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 MT-ND1P03886 318 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 ITGB1P05556 798 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 UGT1A6P19224 532 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 UGT1A1P22309 533 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 UGT1A4P22310 534 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 UGT1A3P35503 534 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 UGT1A5P35504 534 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 ASMTP46597 345 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 GATMP50440 423 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 ADARP55265 1226 aaKnown RBP14.43□□□□□ -0.1
HDAC6-220ENST00000477528 C21orf59P57076 290 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 SPIDRQ14159 915 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 SFT2D3Q587I9 215 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 ZNF605Q86T29 641 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 MZB1Q8WU39 189 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 REXO5Q96IC2 774 aaKnown RBP14.43□□□□□ -0.1
HDAC6-220ENST00000477528 HEPHQ9BQS7 1158 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 ABCB8Q9NUT2 735 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 RGS17Q9UGC6 210 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-220ENST00000477528 EMCNQ9ULC0 261 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 TLL2Q9Y6L7 1015 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 KRT75O95678 551 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 GSNP06396 782 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 HOXD8P13378 290 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-220ENST00000477528 ACADVLP49748 655 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 GPR107Q5VW38 600 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 HIPK1Q86Z02 1210 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 DCAF4L2Q8NA75 395 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 UTP4Q969X6 686 aaKnown RBP14.43□□□□□ -0.1
HDAC6-220ENST00000477528 MOCOSQ96EN8 888 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 RBM4BQ9BQ04 359 aaKnown RBP14.43□□□□□ -0.1
HDAC6-220ENST00000477528 RBM4Q9BWF3 364 aaKnown RBP14.43□□□□□ -0.1
HDAC6-220ENST00000477528 ARHGAP39Q9C0H5 1083 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 MEAF6Q9HAF1 191 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 CD84Q9UIB8 345 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 ASLP04424 464 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 HSMCR30P0CW71 290 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 THRBP10828 461 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 ITGA2P17301 1181 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 CHIT1Q13231 466 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 PLCL1Q15111 1095 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 DGUOKQ16854 277 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 SATL1Q86VE3 508 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 OOSP2Q86WS3 158 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 COLGALT2Q8IYK4 626 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 DNAJB8Q8NHS0 232 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 CHID1Q9BWS9 393 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 FBRSL1Q9HCM7 1045 aaKnown RBP14.42□□□□□ -0.1
HDAC6-220ENST00000477528 A0A1W2PP18 115 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 H3BM21 787 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 PER2O15055 1255 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 RPS14P62263 151 aaKnown RBP14.42□□□□□ -0.1
HDAC6-220ENST00000477528 NAE1Q13564 534 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 XKR4Q5GH76 650 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 TXNDC8Q6A555 127 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 MTSS1LQ765P7 747 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 PACRGLQ8N7B6 248 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 OR10A6Q8NH74 314 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 SORT1Q99523 831 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 SUV39H2Q9H5I1 410 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 ZDHHC3Q9NYG2 299 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 MARCH4Q9P2E8 410 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-220ENST00000477528 ANGPT4Q9Y264 503 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 ARPC2O15144 300 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 COCHO43405 550 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 SUV39H1O43463 412 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 CDK14O94921 469 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 NEK2P51955 445 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 ZC3H12BQ5HYM0 836 aaKnown RBP14.42□□□□□ -0.1
HDAC6-220ENST00000477528 FGD3Q5JSP0 725 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 ARMC6Q6NXE6 501 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 TRIM40Q6P9F5 258 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 PAGE2Q7Z2X7 111 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 THAP5Q7Z6K1 395 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 CACUL1Q86Y37 369 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 KREMEN2Q8NCW0 462 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 B4GALNT2Q8NHY0 566 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 AP2M1Q96CW1 435 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 KLHL32Q96NJ5 620 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 BBS4Q96RK4 519 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 USP3Q9Y6I4 520 aa14.42□□□□□ -0.1
HDAC6-220ENST00000477528 CAPN14A8MX76 684 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 H6PDO95479 791 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 PCYT1AP49585 367 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 MTPNP58546 118 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 ALDH6A1Q02252 535 aaKnown RBP14.41□□□□□ -0.1
HDAC6-220ENST00000477528 OR2AP1Q8NGE2 309 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 NT5C3BQ969T7 300 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 PRRG3Q9BZD7 231 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 KLHL28Q9NXS3 571 aa14.41□□□□□ -0.1
HDAC6-220ENST00000477528 OR2AG2A6NM03 316 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms