RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 VAV2P52735 878 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 TUBB4BP68371 445 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 TUBB2AQ13885 445 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 DPYSL3Q14195 570 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 BECN1Q14457 450 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 NFE2L1Q14494 772 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 PAFAH1B3Q15102 231 aaKnown RBP9.52□□□□□ -0.89
COL4A5-204ENST00000477429 ZRANB3Q5FWF4 1079 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 DNTTIP2Q5QJE6 756 aaKnown RBP9.52□□□□□ -0.89
COL4A5-204ENST00000477429 ZNF385CQ66K41 422 aaPredicted RBP9.52□□□□□ -0.89
COL4A5-204ENST00000477429 WASH2PQ6VEQ5 465 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 TMEM126BQ8IUX1 230 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 TRAM1L1Q8N609 369 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 LILRA3Q8N6C8 439 aaPredicted RBP9.52□□□□□ -0.89
COL4A5-204ENST00000477429 RASGEF1AQ8N9B8 481 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 FAM71BQ8TC56 605 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 UBXN4Q92575 508 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 FCRL4Q96PJ5 515 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 TSGA13Q96PP4 275 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 INSM2Q96T92 566 aaPredicted RBP9.52□□□□□ -0.89
COL4A5-204ENST00000477429 TUBB2BQ9BVA1 445 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 SLC29A3Q9BZD2 475 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 KLHL25Q9H0H3 589 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 ZNF552Q9H707 407 aaPredicted RBP9.52□□□□□ -0.89
COL4A5-204ENST00000477429 ZFYVE1Q9HBF4 777 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 KCND1Q9NSA2 647 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 GPR83Q9NYM4 423 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 SNX7Q9UNH6 387 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 FER1L5A0AVI2 2057 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 COL6A5A8TX70 2615 aa9.52□□□□□ -0.89
COL4A5-204ENST00000477429 PIKFYVEQ9Y2I7 2098 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 RGSL1A5PLK6 1076 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 OR6C74A6NCV1 312 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 OR5K3A6NET4 321 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 SLC9B1P1A6NJY1 282 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 GAPDHSO14556 408 aaPredicted RBP9.51□□□□□ -0.89
COL4A5-204ENST00000477429 LRRTM2O43300 516 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 UGT1A9O60656 530 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 ZG16O60844 167 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 ALOX12BO75342 701 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 KLF7O75840 302 aaPredicted RBP9.51□□□□□ -0.89
COL4A5-204ENST00000477429 CDK14O94921 469 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 UGT1A6P19224 532 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 IDSP22304 550 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 UGT1A1P22309 533 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 UGT1A4P22310 534 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 ZNF135P52742 658 aaPredicted RBP9.51□□□□□ -0.89
COL4A5-204ENST00000477429 TAS2R40P59535 323 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 DCDC1P59894 354 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 RPL26P61254 145 aaKnown RBP9.51□□□□□ -0.89
COL4A5-204ENST00000477429 HSD11B2P80365 405 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 ACY1Q03154 408 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 TMEM115Q12893 351 aaPredicted RBP9.51□□□□□ -0.89
COL4A5-204ENST00000477429 LLGL1Q15334 1064 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 BOLA3Q53S33 107 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 MRGPREQ86SM8 312 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 RAVER1Q8IY67 606 aaKnown RBP9.51□□□□□ -0.89
COL4A5-204ENST00000477429 IQCKQ8N0W5 287 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 NDUFAF2Q8N183 169 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 BEND7Q8N7W2 519 aaPredicted RBP9.51□□□□□ -0.89
COL4A5-204ENST00000477429 AVL9Q8NBF6 648 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 NSMCE1Q8WV22 266 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 NLNQ9BYT8 704 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 UGT1A7Q9HAW7 530 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 UGT1A10Q9HAW8 530 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 UGT1A8Q9HAW9 530 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 RPL26L1Q9UNX3 145 aaKnown RBP9.51□□□□□ -0.89
COL4A5-204ENST00000477429 B3GNT3Q9Y2A9 372 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 ZNF711Q9Y462 761 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 PCDHGB7Q9Y5F8 929 aa9.51□□□□□ -0.89
COL4A5-204ENST00000477429 TLCD2A6NGC4 264 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 LRRC10BA6NIK2 292 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 BUD23O43709 281 aaKnown RBP9.5□□□□□ -0.89
COL4A5-204ENST00000477429 POP7O75817 140 aaKnown RBP9.5□□□□□ -0.89
COL4A5-204ENST00000477429 RAB40ALP0C0E4 278 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 PVRP15151 417 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 POLR2CP19387 275 aaPredicted RBP9.5□□□□□ -0.89
COL4A5-204ENST00000477429 CCNCP24863 283 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 OTX2P32243 289 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 SERPINB6P35237 376 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 GJC1P36383 396 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 PTPRCAPQ14761 206 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 ZRSR2Q15696 482 aaKnown RBP9.5□□□□□ -0.89
COL4A5-204ENST00000477429 PCSK7Q16549 785 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 KYNUQ16719 465 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 ZFYVE27Q5T4F4 411 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 HGSNATQ68CP4 663 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 SP5Q6BEB4 398 aaPredicted RBP9.5□□□□□ -0.89
COL4A5-204ENST00000477429 KCNMB4Q86W47 210 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 TRAPPC5Q8IUR0 188 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 MCEMP1Q8IX19 187 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 SYTL1Q8IYJ3 562 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 SPATA22Q8NHS9 363 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 CCHCR1Q8TD31 782 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 UBE2Q2Q8WVN8 375 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 TEKT4Q8WW24 435 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 SEC14L1Q92503 715 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 TADA1Q96BN2 335 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 LRFN5Q96NI6 719 aa9.5□□□□□ -0.89
COL4A5-204ENST00000477429 MESP1Q9BRJ9 268 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms