RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 BRD9Q9H8M2 597 aa13.21□□□□□ -0.29
HDAC7-221ENST00000477203 MAGEE1Q9HCI5 957 aa13.21□□□□□ -0.29
HDAC7-221ENST00000477203 ZNF225Q9UK10 706 aa13.21□□□□□ -0.29
HDAC7-221ENST00000477203 WASH3PC4AMC7 463 aa13.21□□□□□ -0.3
HDAC7-221ENST00000477203 EFCAB14O75071 495 aa13.21□□□□□ -0.3
HDAC7-221ENST00000477203 PTGER3P43115 390 aa13.21□□□□□ -0.3
HDAC7-221ENST00000477203 CCR3P51677 355 aa13.21□□□□□ -0.3
HDAC7-221ENST00000477203 ARHGEF7Q14155 803 aa13.21□□□□□ -0.3
HDAC7-221ENST00000477203 SERPINA13PQ6UXR4 307 aa13.21□□□□□ -0.3
HDAC7-221ENST00000477203 BNC2Q6ZN30 1099 aaPredicted RBP13.21□□□□□ -0.3
HDAC7-221ENST00000477203 Q6ZVL8 140 aa13.21□□□□□ -0.3
HDAC7-221ENST00000477203 PYCR2Q96C36 320 aa13.21□□□□□ -0.3
HDAC7-221ENST00000477203 SPHK2Q9NRA0 654 aa13.21□□□□□ -0.3
HDAC7-221ENST00000477203 NDE1Q9NXR1 346 aa13.21□□□□□ -0.3
HDAC7-221ENST00000477203 LTBP2Q14767 1821 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 E7ENX8 843 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 GFRA2O00451 464 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 LEFTY1O75610 366 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 BAIAP3O94812 1187 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 ZNF7P17097 686 aaPredicted RBP13.2□□□□□ -0.3
HDAC7-221ENST00000477203 PBLDP30039 288 aaPredicted RBP13.2□□□□□ -0.3
HDAC7-221ENST00000477203 HTR6P50406 440 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 CLCN7P51798 805 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 HTRA4P83105 476 aaPredicted RBP13.2□□□□□ -0.3
HDAC7-221ENST00000477203 HPCAP84074 193 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 PPIGQ13427 754 aaKnown RBP eCLIP13.2□□□□□ -0.38e-6■■■■□ 22.7
HDAC7-221ENST00000477203 ARHGAP15Q53QZ3 475 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 C9orf50Q5SZB4 431 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 NKAPQ8N5F7 415 aaKnown RBP13.2□□□□□ -0.3
HDAC7-221ENST00000477203 ACTRT2Q8TDY3 377 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 ARMC5Q96C12 935 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 TCF12Q99081 682 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 WRAP53Q9BUR4 548 aaKnown RBP13.2□□□□□ -0.3
HDAC7-221ENST00000477203 MRPL1Q9BYD6 325 aaKnown RBP13.2□□□□□ -0.3
HDAC7-221ENST00000477203 EFCAB1Q9HAE3 211 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 GBF1Q92538 1859 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 PDLIM1O00151 329 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 INPP4BO15327 924 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 SH3BGRLO75368 114 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 ATP6V1B1P15313 513 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 STX1BP61266 288 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 AP2B1P63010 937 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 PTSQ03393 145 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 FLOT2Q14254 428 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 PTK2BQ14289 1009 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 AARS2Q5JTZ9 985 aaKnown RBP13.2□□□□□ -0.3
HDAC7-221ENST00000477203 ZNF783Q6ZMS7 281 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 RNF111Q6ZNA4 994 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 C12orf40Q86WS4 652 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 LMNTD1Q8N9Z9 388 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 ZBTB8BQ8NAP8 495 aaPredicted RBP13.2□□□□□ -0.3
HDAC7-221ENST00000477203 BHLHE22Q8NFJ8 381 aaPredicted RBP13.2□□□□□ -0.3
HDAC7-221ENST00000477203 RP9Q8TA86 221 aaKnown RBP13.2□□□□□ -0.3
HDAC7-221ENST00000477203 DLG3Q92796 817 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 PEX13Q92968 403 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 CLP1Q92989 425 aaKnown RBP13.2□□□□□ -0.3
HDAC7-221ENST00000477203 C1orf21Q9H246 121 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 POLG2Q9UHN1 485 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 COQ6Q9Y2Z9 468 aa13.2□□□□□ -0.3
HDAC7-221ENST00000477203 RFXAPO00287 272 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 KPNA3O00505 521 aaPredicted RBP13.19□□□□□ -0.3
HDAC7-221ENST00000477203 ETV3P41162 512 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 GRIA2P42262 883 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 LCP2Q13094 533 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 TSTA3Q13630 321 aaPredicted RBP13.19□□□□□ -0.3
HDAC7-221ENST00000477203 UGT3A2Q3SY77 523 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 L3HYPDHQ96EM0 354 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 MEAF6Q9HAF1 191 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 A0A1W2PQ67 120 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 FBP2O00757 339 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 ESR1P03372 595 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 HSPA8P11142 646 aaKnown RBP13.19□□□□□ -0.3
HDAC7-221ENST00000477203 POLR2EP19388 210 aaKnown RBP13.19□□□□□ -0.3
HDAC7-221ENST00000477203 XPAP23025 273 aaPredicted RBP13.19□□□□□ -0.3
HDAC7-221ENST00000477203 SPAM1P38567 509 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 SUOXP51687 545 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 TRIP10Q15642 601 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 GRAMD1BQ3KR37 738 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 LETMD1Q6P1Q0 360 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 NCCRP1Q6ZVX7 275 aaPredicted RBP13.19□□□□□ -0.3
HDAC7-221ENST00000477203 METTL6Q8TCB7 284 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 TEX37Q96LM6 180 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 CCDC28BQ9BUN5 200 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 STX18Q9P2W9 335 aaKnown RBP13.19□□□□□ -0.3
HDAC7-221ENST00000477203 DOLKQ9UPQ8 538 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 ANGPTL3Q9Y5C1 460 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.19□□□□□ -0.3
HDAC7-221ENST00000477203 CAPN8A6NHC0 703 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 MRASO14807 208 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 CAPN1P07384 714 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 PBX2P40425 430 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 CMPK2Q5EBM0 449 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 CARD16Q5EG05 197 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 REP15Q6BDI9 236 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 SNX20Q7Z614 316 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 GALNT7Q86SF2 657 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 ADIPOR2Q86V24 386 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 SMG7Q92540 1137 aaKnown RBP13.19□□□□□ -0.3
HDAC7-221ENST00000477203 KCNJ9Q92806 393 aa13.19□□□□□ -0.3
HDAC7-221ENST00000477203 RSPRY1Q96DX4 576 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms