RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 UBXN1Q04323 297 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 GALNT3Q14435 633 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 NAA30Q147X3 362 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-213ENST00000476777 PLCL1Q15111 1095 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 ZRSR2Q15696 482 aaKnown RBP11.09□□□□□ -0.63
BRCA1-213ENST00000476777 IFI16Q16666 785 aaKnown RBP11.09□□□□□ -0.63
BRCA1-213ENST00000476777 CCDC122Q5T0U0 273 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 NCBP2-AS2Q69YL0 99 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 SP5Q6BEB4 398 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-213ENST00000476777 TRAPPC5Q8IUR0 188 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 SYTL1Q8IYJ3 562 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 TTC30BQ8N4P2 665 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 ST6GALNAC3Q8NDV1 305 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 CPT1BQ92523 772 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 PPM1MQ96MI6 270 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 TRIB3Q96RU7 358 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 ADGRE3Q9BY15 652 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 ILKAPQ9H0C8 392 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-213ENST00000476777 RAD18Q9NS91 495 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 PCMTD2Q9NV79 361 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 HAUS2Q9NVX0 235 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 FANCLQ9NW38 375 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 HRASLS2Q9NWW9 162 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 PCDHGA10Q9Y5H3 936 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 SCINQ9Y6U3 715 aa11.09□□□□□ -0.63
BRCA1-213ENST00000476777 LRRTM2O43300 516 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 KCNJ13O60928 360 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 SLC4A1P02730 911 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 PIRTP0C851 137 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 BPIP17213 487 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 KPNA2P52292 529 aaKnown RBP11.08□□□□□ -0.64
BRCA1-213ENST00000476777 DMPKQ09013 629 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 TMEM115Q12893 351 aaPredicted RBP11.08□□□□□ -0.64
BRCA1-213ENST00000476777 BECN1Q14457 450 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 KRT81Q14533 505 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 MYBPC3Q14896 1274 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 NCF4Q15080 339 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 PAFAH1B3Q15102 231 aaKnown RBP11.08□□□□□ -0.64
BRCA1-213ENST00000476777 KYNUQ16719 465 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 ZNF789Q5FWF6 425 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 TMTC4Q5T4D3 741 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 LYPLAL1Q5VWZ2 237 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 FBXO38Q6PIJ6 1188 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 FAM83HQ6ZRV2 1179 aaPredicted RBP11.08□□□□□ -0.64
BRCA1-213ENST00000476777 MRGPREQ86SM8 312 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 CUZD1Q86UP6 607 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 AMZ2Q86W34 360 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 RAB43Q86YS6 212 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 SPNS2Q8IVW8 549 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 MCEMP1Q8IX19 187 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 CARFQ8N187 725 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 FAM71BQ8TC56 605 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 CLIP3Q96DZ5 547 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 VPS35Q96QK1 796 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 TLR10Q9BXR5 811 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 ZNF552Q9H707 407 aaPredicted RBP11.08□□□□□ -0.64
BRCA1-213ENST00000476777 MAGEE1Q9HCI5 957 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 MRPL47Q9HD33 250 aaKnown RBP11.08□□□□□ -0.64
BRCA1-213ENST00000476777 SOHLH2Q9NX45 425 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 MYO1AQ9UBC5 1043 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 LIMA1Q9UHB6 759 aaKnown RBP11.08□□□□□ -0.64
BRCA1-213ENST00000476777 PSMD13Q9UNM6 376 aa11.08□□□□□ -0.64
BRCA1-213ENST00000476777 OR6C74A6NCV1 312 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 LRRC10BA6NIK2 292 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 DDX3XO00571 662 aaKnown RBP eCLIP11.07□□□□□ -0.641e-8■■■□□ 17.6
BRCA1-213ENST00000476777 DDX3YO15523 660 aaKnown RBP11.07□□□□□ -0.64
BRCA1-213ENST00000476777 KLF7O75840 302 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-213ENST00000476777 ALPPP05187 535 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 MYBL1P10243 752 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 MTHFD1P11586 935 aaKnown RBP11.07□□□□□ -0.64
BRCA1-213ENST00000476777 GLRBP48167 497 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 ARSEP51690 589 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 PER3P56645 1201 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 PIGHQ14442 188 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-213ENST00000476777 LLGL1Q15334 1064 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 PTCHD3Q3KNS1 767 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 ATP13A5Q4VNC0 1218 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 DCAF10Q5QP82 559 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 CCDC183Q5T5S1 534 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 SPOCD1Q6ZMY3 1216 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 Q6ZS92 163 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 ZNF571Q7Z3V5 609 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-213ENST00000476777 OOSP2Q86WS3 158 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 GALNT16Q8N428 558 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 CNTD1Q8N815 330 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 NIPA2Q8N8Q9 360 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 OR1L3Q8NH93 324 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 GPR63Q9BZJ6 419 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 HAUS4Q9H6D7 363 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 ACTR5Q9H9F9 607 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-213ENST00000476777 ZBTB20Q9HC78 741 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-213ENST00000476777 AGPAT4Q9NRZ5 378 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 MYO6Q9UM54 1294 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 ZNF711Q9Y462 761 aa11.07□□□□□ -0.64
BRCA1-213ENST00000476777 CFAP20Q9Y6A4 193 aaKnown RBP11.07□□□□□ -0.64
BRCA1-213ENST00000476777 ANKHD1Q8IWZ3 2542 aaKnown RBP11.06□□□□□ -0.64
BRCA1-213ENST00000476777 SLC9B1P1A6NJY1 282 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 TMEM150CB9EJG8 249 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 E2F3O00716 465 aa11.06□□□□□ -0.64
BRCA1-213ENST00000476777 AURKAO14965 403 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms