RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 OSBPL9Q96SU4 736 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 WWP1Q9H0M0 922 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 SLC40A1Q9NP59 571 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 WDR70Q9NW82 654 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 SMARCAL1Q9NZC9 954 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 SLC2A6Q9UGQ3 507 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 TTC7AQ9ULT0 858 aaPredicted RBP23.54■■□□□ 1.36
CPNE1-223ENST00000475146 TCAF1Q9Y4C2 921 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 ADAMTS20P59510 1910 aa23.54■■□□□ 1.36
CPNE1-223ENST00000475146 IGLV3-16A0A075B6K0 115 aa23.53■■□□□ 1.36
CPNE1-223ENST00000475146 KLK10O43240 276 aa23.53■■□□□ 1.36
CPNE1-223ENST00000475146 SLC35G4P0C7Q5 338 aa23.53■■□□□ 1.36
CPNE1-223ENST00000475146 PSMA3P25788 255 aa23.53■■□□□ 1.36
CPNE1-223ENST00000475146 TERF1P54274 439 aa23.53■■□□□ 1.36
CPNE1-223ENST00000475146 GPR18Q14330 331 aa23.53■■□□□ 1.36
CPNE1-223ENST00000475146 AFTPHQ6ULP2 937 aa23.53■■□□□ 1.36
CPNE1-223ENST00000475146 CFAP206Q8IYR0 622 aa23.53■■□□□ 1.36
CPNE1-223ENST00000475146 GPR150Q8NGU9 434 aa23.53■■□□□ 1.36
CPNE1-223ENST00000475146 HM13Q8TCT9 377 aa23.53■■□□□ 1.36
CPNE1-223ENST00000475146 COG1Q8WTW3 980 aa23.53■■□□□ 1.36
CPNE1-223ENST00000475146 USP7Q93009 1102 aa23.53■■□□□ 1.36
CPNE1-223ENST00000475146 HDAC10Q969S8 669 aa23.53■■□□□ 1.36
CPNE1-223ENST00000475146 CRELD1Q96HD1 420 aa23.53■■□□□ 1.36
CPNE1-223ENST00000475146 VPS37BQ9H9H4 285 aa23.53■■□□□ 1.36
CPNE1-223ENST00000475146 ACSL5Q9ULC5 683 aa23.53■■□□□ 1.36
CPNE1-223ENST00000475146 CFAP20Q9Y6A4 193 aaKnown RBP23.53■■□□□ 1.36
CPNE1-223ENST00000475146 PRAMEF10O60809 474 aa23.52■■□□□ 1.36
CPNE1-223ENST00000475146 POLBP06746 335 aa23.52■■□□□ 1.36
CPNE1-223ENST00000475146 MTHFD1P11586 935 aaKnown RBP23.52■■□□□ 1.36
CPNE1-223ENST00000475146 FOXN2P32314 431 aa23.52■■□□□ 1.36
CPNE1-223ENST00000475146 PRAMEP78395 509 aa23.52■■□□□ 1.36
CPNE1-223ENST00000475146 TLE3Q04726 772 aa23.52■■□□□ 1.36
CPNE1-223ENST00000475146 BROXQ5VW32 411 aa23.52■■□□□ 1.36
CPNE1-223ENST00000475146 TTC27Q6P3X3 843 aa23.52■■□□□ 1.36
CPNE1-223ENST00000475146 NLRP9Q7RTR0 991 aa23.52■■□□□ 1.36
CPNE1-223ENST00000475146 FAM129CQ86XR2 697 aa23.52■■□□□ 1.36
CPNE1-223ENST00000475146 PLXDC1Q8IUK5 500 aa23.52■■□□□ 1.36
CPNE1-223ENST00000475146 C12orf66Q96MD2 445 aa23.52■■□□□ 1.36
CPNE1-223ENST00000475146 ZNF778Q96MU6 729 aa23.52■■□□□ 1.36
CPNE1-223ENST00000475146 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.52■■□□□ 1.36
CPNE1-223ENST00000475146 OGFRQ9NZT2 677 aa23.52■■□□□ 1.36
CPNE1-223ENST00000475146 PDP2Q9P2J9 529 aa23.52■■□□□ 1.36
CPNE1-223ENST00000475146 RALYQ9UKM9 306 aaKnown RBP23.52■■□□□ 1.36
CPNE1-223ENST00000475146 RIMKLBQ9ULI2 386 aa23.52■■□□□ 1.36
CPNE1-223ENST00000475146 USP27XA6NNY8 438 aa23.51■■□□□ 1.35
CPNE1-223ENST00000475146 NVLO15381 856 aaKnown RBP23.51■■□□□ 1.35
CPNE1-223ENST00000475146 GOT2P00505 430 aaKnown RBP23.51■■□□□ 1.35
CPNE1-223ENST00000475146 GFERP55789 205 aa23.51■■□□□ 1.35
CPNE1-223ENST00000475146 GPS1Q13098 491 aa23.51■■□□□ 1.35
CPNE1-223ENST00000475146 ITIH4Q14624 930 aa23.51■■□□□ 1.35
CPNE1-223ENST00000475146 PLCL1Q15111 1095 aa23.51■■□□□ 1.35
CPNE1-223ENST00000475146 TMEM164Q5U3C3 297 aa23.51■■□□□ 1.35
CPNE1-223ENST00000475146 DUS1LQ6P1R4 473 aaKnown RBP23.51■■□□□ 1.35
CPNE1-223ENST00000475146 PDZD3Q86UT5 571 aa23.51■■□□□ 1.35
CPNE1-223ENST00000475146 LILRA3Q8N6C8 439 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-223ENST00000475146 CLDN19Q8N6F1 224 aa23.51■■□□□ 1.35
CPNE1-223ENST00000475146 OR6P1Q8NGX9 317 aa23.51■■□□□ 1.35
CPNE1-223ENST00000475146 DPH1Q9BZG8 443 aa23.51■■□□□ 1.35
CPNE1-223ENST00000475146 SNX12Q9UMY4 172 aa23.51■■□□□ 1.35
CPNE1-223ENST00000475146 GOLGA6L10A0A0M3HER8 536 aa23.5■■□□□ 1.35
CPNE1-223ENST00000475146 EFCAB7A8K855 629 aa23.5■■□□□ 1.35
CPNE1-223ENST00000475146 AP3B1O00203 1094 aa23.5■■□□□ 1.35
CPNE1-223ENST00000475146 KRT14P02533 472 aa23.5■■□□□ 1.35
CPNE1-223ENST00000475146 FGF3P11487 239 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-223ENST00000475146 NSG1P42857 185 aa23.5■■□□□ 1.35
CPNE1-223ENST00000475146 CRADDP78560 199 aa23.5■■□□□ 1.35
CPNE1-223ENST00000475146 GSE1Q14687 1217 aa23.5■■□□□ 1.35
CPNE1-223ENST00000475146 PCID2Q5JVF3 399 aa23.5■■□□□ 1.35
CPNE1-223ENST00000475146 SPDYE1Q8NFV5 336 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-223ENST00000475146 JPH3Q8WXH2 748 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-223ENST00000475146 RSC1A1Q92681 617 aa23.5■■□□□ 1.35
CPNE1-223ENST00000475146 RMDN2Q96LZ7 410 aa23.5■■□□□ 1.35
CPNE1-223ENST00000475146 TGM7Q96PF1 710 aa23.5■■□□□ 1.35
CPNE1-223ENST00000475146 INSM2Q96T92 566 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-223ENST00000475146 TTC1Q99614 292 aa23.5■■□□□ 1.35
CPNE1-223ENST00000475146 CCM2Q9BSQ5 444 aa23.5■■□□□ 1.35
CPNE1-223ENST00000475146 COG4Q9H9E3 785 aa23.5■■□□□ 1.35
CPNE1-223ENST00000475146 BFARQ9NZS9 450 aa23.5■■□□□ 1.35
CPNE1-223ENST00000475146 FOXJ2Q9P0K8 574 aa23.5■■□□□ 1.35
CPNE1-223ENST00000475146 ZZEF1O43149 2961 aa23.5■■□□□ 1.35
CPNE1-223ENST00000475146 MN1Q10571 1320 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-223ENST00000475146 C9orf172C9J069 976 aa23.49■■□□□ 1.35
CPNE1-223ENST00000475146 AP2A2O94973 939 aa23.49■■□□□ 1.35
CPNE1-223ENST00000475146 TPSB2P20231 275 aa23.49■■□□□ 1.35
CPNE1-223ENST00000475146 COILP38432 576 aaPredicted RBP23.49■■□□□ 1.35
CPNE1-223ENST00000475146 CAPZBP47756 277 aa23.49■■□□□ 1.35
CPNE1-223ENST00000475146 CDK16Q00536 496 aa23.49■■□□□ 1.35
CPNE1-223ENST00000475146 ACVR1Q04771 509 aa23.49■■□□□ 1.35
CPNE1-223ENST00000475146 TPSAB1Q15661 275 aa23.49■■□□□ 1.35
CPNE1-223ENST00000475146 CYP1B1Q16678 543 aa23.49■■□□□ 1.35
CPNE1-223ENST00000475146 LYPLAL1Q5VWZ2 237 aa23.49■■□□□ 1.35
CPNE1-223ENST00000475146 CCDC137Q6PK04 289 aaKnown RBP23.49■■□□□ 1.35
CPNE1-223ENST00000475146 XKR5Q6UX68 686 aa23.49■■□□□ 1.35
CPNE1-223ENST00000475146 ARHGAP22Q7Z5H3 698 aa23.49■■□□□ 1.35
CPNE1-223ENST00000475146 ACTRT1Q8TDG2 376 aa23.49■■□□□ 1.35
CPNE1-223ENST00000475146 PEX13Q92968 403 aa23.49■■□□□ 1.35
CPNE1-223ENST00000475146 ART4Q93070 314 aa23.49■■□□□ 1.35
CPNE1-223ENST00000475146 IL22Q9GZX6 179 aa23.49■■□□□ 1.35
CPNE1-223ENST00000475146 CHRAC1Q9NRG0 131 aa23.49■■□□□ 1.35
CPNE1-223ENST00000475146 OCIAD1Q9NX40 245 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms