RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 FLOT2Q14254 428 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 RBBP7Q16576 425 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 GEN1Q17RS7 908 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 SMU1Q2TAY7 513 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 MMEL1Q495T6 779 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 SPATS1Q496A3 300 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 ATP13A5Q4VNC0 1218 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 FBXO48Q5FWF7 155 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 OGFRL1Q5TC84 451 aaPredicted RBP9.66□□□□□ -0.86
USP39-214ENST00000474572 SULT1C3Q6IMI6 304 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 IRGCQ6NXR0 463 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 LETMD1Q6P1Q0 360 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 Q6ZSR9 355 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 GRASPQ7Z6J2 395 aaPredicted RBP9.66□□□□□ -0.86
USP39-214ENST00000474572 RETREG3Q86VR2 466 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 GALNT13Q8IUC8 556 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 DDIASQ8IXT1 998 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 RAVER1Q8IY67 606 aaKnown RBP9.66□□□□□ -0.86
USP39-214ENST00000474572 MINDY1Q8N5J2 469 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 CLDN19Q8N6F1 224 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 PCYOX1LQ8NBM8 494 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 OR52B6Q8NGF0 335 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 OR2T11Q8NH01 316 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 PBXIP1Q96AQ6 731 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 RHBDF1Q96CC6 855 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 ASIC4Q96FT7 647 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 LRIG1Q96JA1 1093 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 ZSWIM3Q96MP5 696 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 SAMD11Q96NU1 681 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 COPS8Q99627 209 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 ZNF184Q99676 751 aaPredicted RBP9.66□□□□□ -0.86
USP39-214ENST00000474572 ECSITQ9BQ95 431 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 LBHD1Q9BQE6 289 aaPredicted RBP9.66□□□□□ -0.86
USP39-214ENST00000474572 HEBP1Q9NRV9 189 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 RAD18Q9NS91 495 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 RIC8BQ9NVN3 520 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 ELOVL2Q9NXB9 296 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 PKD2L2Q9NZM6 624 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 ZIM2Q9NZV7 527 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 C6orf203Q9P0P8 240 aaPredicted RBP9.66□□□□□ -0.86
USP39-214ENST00000474572 MAP10Q9P2G4 905 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 DKK3Q9UBP4 350 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 PRKAG2Q9UGJ0 569 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 DPP7Q9UHL4 492 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 ADAMTS6Q9UKP5 1117 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 PACSIN3Q9UKS6 424 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 SLC27A6Q9Y2P4 619 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 CCL27Q9Y4X3 112 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 TIMM22Q9Y584 194 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 HCFC2Q9Y5Z7 792 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 WNT6Q9Y6F9 365 aa9.66□□□□□ -0.86
USP39-214ENST00000474572 UPK3BL1B0FP48 263 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 UPK3BL2E5RIL1 263 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 FXYD1O00168 92 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 GIPC1O14908 333 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 SLC16A5O15375 505 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 CFLARO15519 480 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 NUAK1O60285 661 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 OTCP00480 354 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 CYP17A1P05093 508 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 ENO2P09104 434 aaPredicted RBP9.65□□□□□ -0.86
USP39-214ENST00000474572 OR56A5P0C7T3 313 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 VCLP18206 1134 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 POLR2EP19388 210 aaKnown RBP9.65□□□□□ -0.86
USP39-214ENST00000474572 MSH3P20585 1137 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 AOAHP28039 575 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 GGT5P36269 586 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 HTR6P50406 440 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 RALGDSQ12967 914 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 BLMHQ13867 455 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 GTF2H2Q13888 395 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 RCAN2Q14206 197 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 TRIM25Q14258 630 aaKnown RBP9.65□□□□□ -0.86
USP39-214ENST00000474572 DHCR24Q15392 516 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 PHKG1Q16816 387 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 KIF19Q2TAC6 998 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 SAMD4BQ5PRF9 694 aaKnown RBP9.65□□□□□ -0.86
USP39-214ENST00000474572 C6orf136Q5SQH8 315 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 PLEKHS1Q5SXH7 462 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 ANO7Q6IWH7 933 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 GTF2H2CQ6P1K8 395 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 PRMT9Q6P2P2 845 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 BLOC1S3Q6QNY0 202 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 RFLNAQ6ZTI6 216 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 NEK10Q6ZWH5 1172 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 DPPA4Q7L190 304 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 SPRED2Q7Z698 418 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 PDSS2Q86YH6 399 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 TICAM1Q8IUC6 712 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 ETFBKMTQ8IXQ9 262 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 PQLC1Q8N2U9 271 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 CELF5Q8N6W0 485 aaKnown RBP9.65□□□□□ -0.86
USP39-214ENST00000474572 DDHD1Q8NEL9 900 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 OR4F6Q8NGB9 312 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 OSCP1Q8WVF1 389 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 ESAMQ96AP7 390 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 HOPXQ9BPY8 73 aaPredicted RBP9.65□□□□□ -0.86
USP39-214ENST00000474572 NTMT1Q9BV86 223 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 CD244Q9BZW8 370 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 VCX3BQ9H321 246 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms