RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 OR52K1Q8NGK4 314 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 STYXQ8WUJ0 223 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 NAT14Q8WUY8 206 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 SNRNP27Q8WVK2 155 aaKnown RBP10.96□□□□□ -0.65
CKS1B-206ENST00000474215 MAIP1Q8WWC4 291 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 CDKN2AIPNLQ96HQ2 116 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 LINC00615Q96LM1 132 aaPredicted RBP10.96□□□□□ -0.65
CKS1B-206ENST00000474215 C9orf72Q96LT7 481 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 UBL7Q96S82 380 aaPredicted RBP10.96□□□□□ -0.65
CKS1B-206ENST00000474215 DDA1Q9BW61 102 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 RAB6BQ9NRW1 208 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 WDR70Q9NW82 654 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 ZDHHC3Q9NYG2 299 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 KLHL3Q9UH77 587 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 ZKSCAN5Q9Y2L8 839 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 MN1Q10571 1320 aaPredicted RBP10.95□□□□□ -0.66
CKS1B-206ENST00000474215 MGAQ8IWI9 3026 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 IGLV3-16A0A075B6K0 115 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.95□□□□□ -0.66
CKS1B-206ENST00000474215 K7ENP7 123 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 TOX3O15405 576 aaPredicted RBP10.95□□□□□ -0.66
CKS1B-206ENST00000474215 CEP104O60308 925 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 FGGP02679 453 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 C9P02748 559 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 POLBP06746 335 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 ANKRD34CP0C6C1 535 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 ACRV1P26436 265 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 RPL22P35268 128 aaKnown RBP10.95□□□□□ -0.66
CKS1B-206ENST00000474215 ARSDP51689 593 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 RAB15P59190 212 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 CACNG1Q06432 222 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 SEMA5AQ13591 1074 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 LAMB3Q13751 1172 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 CCDC38Q502W7 563 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 INO80CQ6PI98 192 aaPredicted RBP10.95□□□□□ -0.66
CKS1B-206ENST00000474215 C4orf22Q6V702 233 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 PPP1R21Q6ZMI0 780 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 PRUNE1Q86TP1 453 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 SERPINA9Q86WD7 417 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 CFAP206Q8IYR0 622 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 PIP4P2Q8N4L2 257 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 GLIS1Q8NBF1 620 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 PMEPA1Q969W9 287 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 ZDHHC12Q96GR4 267 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 TGM7Q96PF1 710 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 BBC3Q96PG8 261 aaPredicted RBP10.95□□□□□ -0.66
CKS1B-206ENST00000474215 INSM2Q96T92 566 aaPredicted RBP10.95□□□□□ -0.66
CKS1B-206ENST00000474215 CCM2Q9BSQ5 444 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 WWP1Q9H0M0 922 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 GRPEL1Q9HAV7 217 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 FBXO8Q9NRD0 319 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 PAK5Q9P286 719 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 B3GALT1Q9Y5Z6 326 aa10.95□□□□□ -0.66
CKS1B-206ENST00000474215 ZFC3H1O60293 1989 aaKnown RBP10.95□□□□□ -0.66
CKS1B-206ENST00000474215 C17orf113A0A1B0GUU1 675 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 CCDC78A2IDD5 438 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 HEATR9A2RTY3 570 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 STMND1H3BQB6 276 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 CAPN5O15484 640 aaPredicted RBP10.94□□□□□ -0.66
CKS1B-206ENST00000474215 APRTP07741 180 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 SLC35G4P0C7Q5 338 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 ZSCAN5DPP0CG00 497 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 MTHFD1P11586 935 aaKnown RBP10.94□□□□□ -0.66
CKS1B-206ENST00000474215 ADRA1DP25100 572 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 CXCR5P32302 372 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 GRIA1P42261 906 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 CAPZBP47756 277 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 LEPRP48357 1165 aaKnown RBP10.94□□□□□ -0.66
CKS1B-206ENST00000474215 PRLHRP49683 370 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 GFERP55789 205 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 ANKS6Q68DC2 871 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 CAPRIN2Q6IMN6 1127 aaKnown RBP10.94□□□□□ -0.66
CKS1B-206ENST00000474215 KLHL35Q6PF15 583 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 XKR5Q6UX68 686 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 MICALCLQ6ZW33 695 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 GSTA5Q7RTV2 222 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 PIANPQ8IYJ0 282 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 CLDN19Q8N6F1 224 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 LSM14AQ8ND56 463 aaKnown RBP10.94□□□□□ -0.66
CKS1B-206ENST00000474215 SPDYE1Q8NFV5 336 aaPredicted RBP10.94□□□□□ -0.66
CKS1B-206ENST00000474215 GPR150Q8NGU9 434 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 HM13Q8TCT9 377 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 ZFPM2Q8WW38 1151 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 RSC1A1Q92681 617 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 C12orf66Q96MD2 445 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 TEFMQ96QE5 360 aaKnown RBP10.94□□□□□ -0.66
CKS1B-206ENST00000474215 RANBP9Q96S59 729 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 ZPBPQ9BS86 351 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 RAB33BQ9H082 229 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 CASS4Q9NQ75 786 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 HOMER3Q9NSC5 361 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 IMP3Q9NV31 184 aaKnown RBP10.94□□□□□ -0.66
CKS1B-206ENST00000474215 FAM8A1Q9UBU6 413 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 EPHA6Q9UF33 1036 aa10.94□□□□□ -0.66
CKS1B-206ENST00000474215 CFAP20Q9Y6A4 193 aaKnown RBP10.94□□□□□ -0.66
CKS1B-206ENST00000474215 CCDC162PA2VCL2 907 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 TK2O00142 265 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 POLR1CO15160 346 aaPredicted RBP10.93□□□□□ -0.66
CKS1B-206ENST00000474215 ATXN7O15265 892 aaPredicted RBP10.93□□□□□ -0.66
CKS1B-206ENST00000474215 KIF1CO43896 1103 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms