RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 AFAP1L2Q8N4X5 818 aa12.62□□□□□ -0.39
VPS13D-205ENST00000473099 OR2T34Q8NGX1 318 aa12.62□□□□□ -0.39
VPS13D-205ENST00000473099 PIWIL2Q8TC59 973 aaKnown RBP12.62□□□□□ -0.39
VPS13D-205ENST00000473099 LKAAEAR1Q8TD35 194 aa12.62□□□□□ -0.39
VPS13D-205ENST00000473099 ELMO1Q92556 727 aa12.62□□□□□ -0.39
VPS13D-205ENST00000473099 GLMNQ92990 594 aa12.62□□□□□ -0.39
VPS13D-205ENST00000473099 FUBP1Q96AE4 644 aaKnown RBP12.62□□□□□ -0.39
VPS13D-205ENST00000473099 ERLEC1Q96DZ1 483 aa12.62□□□□□ -0.39
VPS13D-205ENST00000473099 SGF29Q96ES7 293 aa12.62□□□□□ -0.39
VPS13D-205ENST00000473099 CCDC97Q96F63 343 aaPredicted RBP12.62□□□□□ -0.39
VPS13D-205ENST00000473099 LINC00615Q96LM1 132 aaPredicted RBP12.62□□□□□ -0.39
VPS13D-205ENST00000473099 CCM2Q9BSQ5 444 aa12.62□□□□□ -0.39
VPS13D-205ENST00000473099 ERVK-6Q9BXR3 956 aa12.62□□□□□ -0.39
VPS13D-205ENST00000473099 SLC17A9Q9BYT1 436 aa12.62□□□□□ -0.39
VPS13D-205ENST00000473099 TRIM54Q9BYV2 358 aa12.62□□□□□ -0.39
VPS13D-205ENST00000473099 UNKQ9C0B0 810 aaKnown RBP12.62□□□□□ -0.39
VPS13D-205ENST00000473099 ILKAPQ9H0C8 392 aaPredicted RBP12.62□□□□□ -0.39
VPS13D-205ENST00000473099 STN1Q9H668 368 aaKnown RBP12.62□□□□□ -0.39
VPS13D-205ENST00000473099 RDH14Q9HBH5 336 aa12.62□□□□□ -0.39
VPS13D-205ENST00000473099 LTB4R2Q9NPC1 389 aa12.62□□□□□ -0.39
VPS13D-205ENST00000473099 PHPT1Q9NRX4 125 aaPredicted RBP12.62□□□□□ -0.39
VPS13D-205ENST00000473099 HAO1Q9UJM8 370 aa12.62□□□□□ -0.39
VPS13D-205ENST00000473099 ZFR2Q9UPR6 939 aaKnown RBP12.62□□□□□ -0.39
VPS13D-205ENST00000473099 RAP2CQ9Y3L5 183 aa12.62□□□□□ -0.39
VPS13D-205ENST00000473099 DNMT3AQ9Y6K1 912 aaPredicted RBP12.62□□□□□ -0.39
VPS13D-205ENST00000473099 USH1CQ9Y6N9 552 aa12.62□□□□□ -0.39
VPS13D-205ENST00000473099 LRP4O75096 1905 aa12.62□□□□□ -0.39
VPS13D-205ENST00000473099 C17orf113A0A1B0GUU1 675 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 A0A1W2PQU0 124 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 PABPN1LA6NDY0 278 aaKnown RBP12.61□□□□□ -0.39
VPS13D-205ENST00000473099 SLCO1B7G3V0H7 640 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 LIN7AO14910 233 aaPredicted RBP12.61□□□□□ -0.39
VPS13D-205ENST00000473099 SLC16A5O15375 505 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 SGTAO43765 313 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 KLK8O60259 260 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 SNX2O60749 519 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 IGLV3-19P01714 112 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 GABRG2P18507 467 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 CD72P21854 359 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 TARSP26639 723 aaKnown RBP12.61□□□□□ -0.39
VPS13D-205ENST00000473099 OXTRP30559 389 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 CCR7P32248 378 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 TRIM23P36406 574 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 ALDH18A1P54886 795 aaKnown RBP12.61□□□□□ -0.39
VPS13D-205ENST00000473099 WSCD2Q2TBF2 565 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 SYTL3Q4VX76 610 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 KHDC1Q4VXA5 237 aaKnown RBP12.61□□□□□ -0.39
VPS13D-205ENST00000473099 ACSBG2Q5FVE4 666 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 CGB2Q6NT52 195 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 METTL2BQ6P1Q9 378 aaKnown RBP12.61□□□□□ -0.39
VPS13D-205ENST00000473099 TTC23LQ6PF05 361 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 TMEM220Q6QAJ8 160 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 TRIM67Q6ZTA4 783 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 DET1Q7L5Y6 550 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 ADGRG6Q86SQ4 1221 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 RASGEF1AQ8N9B8 481 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 TP53I13Q8NBR0 393 aaPredicted RBP12.61□□□□□ -0.39
VPS13D-205ENST00000473099 TMEM159Q96B96 161 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 LENG8Q96PV6 779 aaPredicted RBP12.61□□□□□ -0.39
VPS13D-205ENST00000473099 C1QTNF3Q9BXJ4 246 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 TEX101Q9BY14 249 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 OSBPL6Q9BZF3 934 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 BTBD1Q9H0C5 482 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 LMAN1LQ9HAT1 526 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 NPHS2Q9NP85 383 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 ITM2CQ9NQX7 267 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 KCNK4Q9NYG8 393 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 USP36Q9P275 1121 aaKnown RBP12.61□□□□□ -0.39
VPS13D-205ENST00000473099 MTF2Q9Y483 593 aaPredicted RBP12.61□□□□□ -0.39
VPS13D-205ENST00000473099 OARD1Q9Y530 152 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 TNPO3Q9Y5L0 923 aaKnown RBP12.61□□□□□ -0.39
VPS13D-205ENST00000473099 EML5Q05BV3 1969 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 FANCMQ8IYD8 2048 aa12.61□□□□□ -0.39
VPS13D-205ENST00000473099 TP53BP1Q12888 1972 aaPredicted RBP12.6□□□□□ -0.39
VPS13D-205ENST00000473099 OR2AG2A6NM03 316 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 K7ESM1 405 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 UBXN8O00124 270 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 CDC7O00311 574 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 MTX2O75431 263 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 GPC4O75487 556 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 DCTN3O75935 186 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 SLCO2B1O94956 709 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 PCCBP05166 539 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 HOXC4P09017 264 aaPredicted RBP12.6□□□□□ -0.39
VPS13D-205ENST00000473099 MTHFD2P13995 350 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 NUDT1P36639 197 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 TPMTP51580 245 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 CDK3Q00526 305 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 CDKL1Q00532 357 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 BOP1Q14137 746 aaKnown RBP12.6□□□□□ -0.39
VPS13D-205ENST00000473099 UBXN2BQ14CS0 331 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 IRF4Q15306 451 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 TGFBIQ15582 683 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 ZNF678Q5SXM1 525 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 SEL1L3Q68CR1 1132 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 SBSNQ6UWP8 590 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 NAPRTQ6XQN6 538 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 FRMD7Q6ZUT3 714 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 HEATR4Q86WZ0 1026 aa12.6□□□□□ -0.39
VPS13D-205ENST00000473099 TCAIMQ8N3R3 496 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms