RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 MAATS1Q7Z4T9 603 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 CAND1Q86VP6 1230 aaKnown RBP9.02□□□□□ -0.97
SMC4-213ENST00000472282 GKN2Q86XP6 184 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 NRROSQ86YC3 692 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 ZNF248Q8NDW4 579 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 MNS1Q8NEH6 495 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 PPHLN1Q8NEY8 458 aaKnown RBP9.02□□□□□ -0.97
SMC4-213ENST00000472282 GLMNQ92990 594 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 NAT6Q93015 286 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 SNF8Q96H20 258 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 ZNF578Q96N58 590 aaPredicted RBP9.02□□□□□ -0.97
SMC4-213ENST00000472282 SERPINB12Q96P63 405 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 RANBP9Q96S59 729 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 KRTAP4-12Q9BQ66 201 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 ZSCAN5AQ9BUG6 496 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 TEX101Q9BY14 249 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 FOXP3Q9BZS1 431 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 CDH19Q9H159 772 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 DPH5Q9H2P9 285 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 CPNE5Q9HCH3 593 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 SPATS2LQ9NUQ6 558 aaKnown RBP9.02□□□□□ -0.97
SMC4-213ENST00000472282 SYBUQ9NX95 663 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 NCKIPSDQ9NZQ3 722 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 BFARQ9NZS9 450 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 MOSPD1Q9UJG1 213 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 TCAF1Q9Y4C2 921 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 PLEKHM1Q9Y4G2 1056 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 SDK2Q58EX2 2172 aa9.02□□□□□ -0.97
SMC4-213ENST00000472282 NBEAQ8NFP9 2946 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 CTAGE15A4D2H0 777 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 MROH6A6NGR9 719 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 A6NJY4 79 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 CDRT15L2A8MXV6 281 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 D6RAR5 112 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 AP3B1O00203 1094 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 TCEA3O75764 348 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 C1QL1O75973 258 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 SEC31AO94979 1220 aaKnown RBP9.01□□□□□ -0.97
SMC4-213ENST00000472282 PRAMEF1O95521 474 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 CEACAM5P06731 702 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 HOXC4P09017 264 aaPredicted RBP9.01□□□□□ -0.97
SMC4-213ENST00000472282 FURINP09958 794 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 CTAGE8P0CG41 777 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 HGFP14210 728 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 KELP23276 732 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 ADRA1DP25100 572 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 AK4P27144 223 aaPredicted RBP9.01□□□□□ -0.97
SMC4-213ENST00000472282 MC4RP32245 332 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 HADHAP40939 763 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 NPY2RP49146 381 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 ITGA8P53708 1063 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 MAZP56270 477 aaKnown RBP9.01□□□□□ -0.97
SMC4-213ENST00000472282 ERVPABLB-1P60509 514 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 CXADRP78310 365 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 XIAPP98170 497 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 MORF4L2Q15014 288 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 CHRNA6Q15825 494 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 ATP13A5Q4VNC0 1218 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 PCID2Q5JVF3 399 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 DNTTIP2Q5QJE6 756 aaKnown RBP9.01□□□□□ -0.97
SMC4-213ENST00000472282 TSTD2Q5T7W7 516 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 ZDHHC20Q5W0Z9 365 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 PDPK2PQ6A1A2 396 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 TAF8Q7Z7C8 310 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 PCGF5Q86SE9 256 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 CTAGE6Q86UF2 777 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 HOOK3Q86VS8 718 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 CTAGE4Q8IX94 777 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 MPP5Q8N3R9 675 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 Q8N9G6 341 aaPredicted RBP9.01□□□□□ -0.97
SMC4-213ENST00000472282 NOA1Q8NC60 698 aaKnown RBP9.01□□□□□ -0.97
SMC4-213ENST00000472282 MCUQ8NE86 351 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 FAM46DQ8NEK8 389 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 STYXQ8WUJ0 223 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 PATE1Q8WXA2 126 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 COX14Q96I36 57 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 ZNF778Q96MU6 729 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 SLC46A1Q96NT5 459 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 ERP44Q9BS26 406 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 CARD6Q9BX69 1037 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 FRMD8Q9BZ67 464 aaPredicted RBP9.01□□□□□ -0.97
SMC4-213ENST00000472282 IL22Q9GZX6 179 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 LRRN3Q9H3W5 708 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 CARS2Q9HA77 564 aaKnown RBP9.01□□□□□ -0.97
SMC4-213ENST00000472282 XAB2Q9HCS7 855 aaKnown RBP9.01□□□□□ -0.97
SMC4-213ENST00000472282 ARFGAP3Q9NP61 516 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 IL26Q9NPH9 171 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 NLE1Q9NVX2 485 aaPredicted RBP9.01□□□□□ -0.97
SMC4-213ENST00000472282 SLC2A6Q9UGQ3 507 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 SNX24Q9Y343 169 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 PCYT1BQ9Y5K3 369 aaPredicted RBP9.01□□□□□ -0.97
SMC4-213ENST00000472282 OAS3Q9Y6K5 1087 aaKnown RBP9.01□□□□□ -0.97
SMC4-213ENST00000472282 RNF215Q9Y6U7 377 aa9.01□□□□□ -0.97
SMC4-213ENST00000472282 CCDC187A0A096LP49 1063 aa9□□□□□ -0.97
SMC4-213ENST00000472282 TNFRSF10CO14798 259 aa9□□□□□ -0.97
SMC4-213ENST00000472282 KLK10O43240 276 aa9□□□□□ -0.97
SMC4-213ENST00000472282 UGT1A9O60656 530 aa9□□□□□ -0.97
SMC4-213ENST00000472282 BANF1O75531 89 aa9□□□□□ -0.97
SMC4-213ENST00000472282 SRP72O76094 671 aaKnown RBP9□□□□□ -0.97
SMC4-213ENST00000472282 TNFSF15O95150 251 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms