RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 LCA5LO95447 670 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 HNRNPH3P31942 346 aaKnown RBP12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 SSR1P43307 286 aaKnown RBP12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 KPNA2P52292 529 aaKnown RBP12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 RIPPLY3P57055 190 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 MYL5Q02045 173 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 DMPKQ09013 629 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 SLC10A2Q12908 348 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 ZBTB17Q13105 803 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 KYNUQ16719 465 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 ATP13A5Q4VNC0 1218 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 CRB2Q5IJ48 1285 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 FAM198BQ6UWH4 519 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 OOSP2Q86WS3 158 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 GDAP1Q8TB36 358 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 MARVELD3Q96A59 401 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 HDAC11Q96DB2 347 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 SGSM3Q96HU1 749 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 BARD1Q99728 777 aaKnown RBP12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 TLR10Q9BXR5 811 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 HSD3B7Q9H2F3 369 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 BPIFA1Q9NP55 256 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 IMP3Q9NV31 184 aaKnown RBP12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 PCMTD2Q9NV79 361 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 SOHLH2Q9NX45 425 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 BTRCQ9Y297 605 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 COPG1Q9Y678 874 aaKnown RBP12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 CFAP20Q9Y6A4 193 aaKnown RBP12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 SPTBP11277 2137 aa12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 DIDO1Q9BTC0 2240 aaKnown RBP12.5□□□□□ -0.41
TRAPPC12-216ENST00000469400 OTOGQ6ZRI0 2925 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 ARHGAP10A1A4S6 786 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 OR6C74A6NCV1 312 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 AURKAO14965 403 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 HNRNPRO43390 633 aaKnown RBP12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 MTHFD1P11586 935 aaKnown RBP12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 SKILP12757 684 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 CA5AP35218 305 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 PRKCIP41743 596 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 CTSCP53634 463 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 IFI35P80217 286 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 KLHL30Q0D2K2 578 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 NFE2L1Q14494 772 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 NCF4Q15080 339 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 PCSK7Q16549 785 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 PTCHD3Q3KNS1 767 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 ZNF789Q5FWF6 425 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 LYPLAL1Q5VWZ2 237 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 ARMC6Q6NXE6 501 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 IGFL3Q6UXB1 125 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 SYTL1Q8IYJ3 562 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 CARFQ8N187 725 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 PQLC3Q8N755 202 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 RASGEF1AQ8N9B8 481 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 KCTD6Q8NC69 237 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 BRSK1Q8TDC3 778 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 INPP5DQ92835 1189 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 MOCOSQ96EN8 888 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 IMP4Q96G21 291 aaKnown RBP12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 TTC25Q96NG3 672 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 ZNF670Q9BS34 389 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 XPO4Q9C0E2 1151 aaKnown RBP12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 ILKAPQ9H0C8 392 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 THAP2Q9H0W7 228 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 FANCEQ9HB96 536 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 TMEM63CQ9P1W3 806 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 ANAPC7Q9UJX3 599 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 NTNG1Q9Y2I2 539 aa12.49□□□□□ -0.41
TRAPPC12-216ENST00000469400 PCSK5Q92824 1860 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 F8P00451 2351 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 SLC9B1P1A6NJY1 282 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 ALPPP05187 535 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 OTX2P32243 289 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 GJC1P36383 396 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 GLRBP48167 497 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 ARCN1P48444 511 aaKnown RBP12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 PPIDQ08752 370 aaKnown RBP12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 XRCC4Q13426 336 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 HADHQ16836 314 aaKnown RBP12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 METRNLQ641Q3 311 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 DUS1LQ6P1R4 473 aaKnown RBP12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 NT5DC3Q86UY8 548 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 RAB43Q86YS6 212 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 OR1L3Q8NH93 324 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 UBE2Q2Q8WVN8 375 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 FAF2Q96CS3 445 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 INSM2Q96T92 566 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 CEP41Q9BYV8 373 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 ACTR5Q9H9F9 607 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 IL26Q9NPH9 171 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 SLC24A2Q9UI40 661 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 ENTPD4Q9Y227 616 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 SPO11Q9Y5K1 396 aa12.48□□□□□ -0.41
TRAPPC12-216ENST00000469400 APCP25054 2843 aa12.47□□□□□ -0.41
TRAPPC12-216ENST00000469400 OR2AG2A6NM03 316 aa12.47□□□□□ -0.41
TRAPPC12-216ENST00000469400 TMEM150CB9EJG8 249 aa12.47□□□□□ -0.41
TRAPPC12-216ENST00000469400 MYO1FO00160 1098 aa12.47□□□□□ -0.41
TRAPPC12-216ENST00000469400 LRRTM2O43300 516 aa12.47□□□□□ -0.41
TRAPPC12-216ENST00000469400 KLF7O75840 302 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC12-216ENST00000469400 KRT38O76015 456 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms