RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 WASH6PQ9NQA3 447 aa18.59■□□□□ 0.57
LMNB1-204ENST00000463908 CPED1A4D0V7 1026 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 CASC3O15234 703 aaKnown RBP18.58■□□□□ 0.56
LMNB1-204ENST00000463908 PPM1DO15297 605 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 F3P13726 295 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 IDSP22304 550 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 RPS3P23396 243 aaKnown RBP eCLIP18.58■□□□□ 0.568e-7■■■□□ 17.9
LMNB1-204ENST00000463908 GABRB3P28472 473 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 MAGEA4P43358 317 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 GPX6P59796 221 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 CLCA4Q14CN2 919 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 CTSL3PQ5NE16 218 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 PERM1Q5SV97 790 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 TEDDM1Q5T9Z0 273 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 AGAP9Q5VTM2 703 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 SFRP1Q8N474 314 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 LKAAEAR1Q8TD35 194 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 GLMNQ92990 594 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 C9orf72Q96LT7 481 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 NCKIPSDQ9NZQ3 722 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 RABGEF1Q9UJ41 708 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 FBXO5Q9UKT4 447 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 CRYL1Q9Y2S2 319 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 RNF215Q9Y6U7 377 aa18.58■□□□□ 0.56
LMNB1-204ENST00000463908 HAUS5O94927 633 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 OR56A5P0C7T3 313 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 FTH1P19P0C7X4 201 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 VCLP18206 1134 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 SSTR1P30872 391 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 FMO4P31512 558 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 SLC1A2P43004 574 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 RPIAP49247 311 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 DUSP3P51452 185 aaPredicted RBP18.57■□□□□ 0.56
LMNB1-204ENST00000463908 MPP1Q00013 466 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 SEPT7Q16181 437 aaKnown RBP18.57■□□□□ 0.56
LMNB1-204ENST00000463908 NAPRTQ6XQN6 538 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 EFL1Q7Z2Z2 1120 aaKnown RBP18.57■□□□□ 0.56
LMNB1-204ENST00000463908 CCDC25Q86WR0 208 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 CNTN4Q8IWV2 1026 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 PALM2Q8IXS6 379 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 LMNTD2Q8IXW0 634 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 KRT222Q8N1A0 295 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 C2CD4AQ8NCU7 369 aaPredicted RBP18.57■□□□□ 0.56
LMNB1-204ENST00000463908 GSDMBQ8TAX9 411 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 CALML6Q8TD86 181 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 SLC37A2Q8TED4 501 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 FBXO6Q9NRD1 293 aaPredicted RBP18.57■□□□□ 0.56
LMNB1-204ENST00000463908 INTS10Q9NVR2 710 aaKnown RBP18.57■□□□□ 0.56
LMNB1-204ENST00000463908 ZNF624Q9P2J8 865 aaPredicted RBP18.57■□□□□ 0.56
LMNB1-204ENST00000463908 SLC17A6Q9P2U8 582 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 FAM8A1Q9UBU6 413 aa18.57■□□□□ 0.56
LMNB1-204ENST00000463908 PRAMEF33A0A0G2JMD5 474 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 UBA6A0AVT1 1052 aaPredicted RBP18.56■□□□□ 0.56
LMNB1-204ENST00000463908 KLHL33A6NCF5 533 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 QSOX1O00391 747 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 ITGB6P18564 788 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 XRCC1P18887 633 aaPredicted RBP18.56■□□□□ 0.56
LMNB1-204ENST00000463908 PDHA2P29803 388 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 CCR7P32248 378 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 LEPRP48357 1165 aaKnown RBP18.56■□□□□ 0.56
LMNB1-204ENST00000463908 ADARP55265 1226 aaKnown RBP18.56■□□□□ 0.56
LMNB1-204ENST00000463908 EIF3BP55884 814 aaKnown RBP18.56■□□□□ 0.56
LMNB1-204ENST00000463908 RNF187Q5TA31 235 aaPredicted RBP18.56■□□□□ 0.56
LMNB1-204ENST00000463908 N4BP2L1Q5TBK1 243 aaPredicted RBP18.56■□□□□ 0.56
LMNB1-204ENST00000463908 ZNF549Q6P9A3 640 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 CNSTQ6PJW8 725 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 CAPN12Q6ZSI9 719 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 LRRC6Q86X45 466 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 IFI44Q8TCB0 444 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 HM13Q8TCT9 377 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 FAM167BQ9BTA0 163 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 FAM129AQ9BZQ8 928 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 COG4Q9H9E3 785 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 LRRC4CQ9HCJ2 640 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 SMYD2Q9NRG4 433 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 LRIT1Q9P2V4 623 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 GALPQ9UBC7 116 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 ACSL5Q9ULC5 683 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 PSMD13Q9UNM6 376 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 PCDHGA1Q9Y5H4 931 aa18.56■□□□□ 0.56
LMNB1-204ENST00000463908 CNOT1A5YKK6 2376 aaKnown RBP18.55■□□□□ 0.56
LMNB1-204ENST00000463908 SLC5A10A0PJK1 596 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 OR5K4A6NMS3 321 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 OR52A4PA6NMU1 304 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 PDZK1P1A8MUH7 402 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 TRIM16O95361 564 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 C1QAP02745 245 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 AHSGP02765 367 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 FTH1P02794 183 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 GSTM1P09488 218 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 GLB1P16278 677 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 KCNA4P22459 653 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 SLC19A1P41440 591 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 GSTM4Q03013 218 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.55■□□□□ 0.56
LMNB1-204ENST00000463908 PTRHD1Q6GMV3 140 aaKnown RBP18.55■□□□□ 0.56
LMNB1-204ENST00000463908 CAPRIN2Q6IMN6 1127 aaKnown RBP18.55■□□□□ 0.56
LMNB1-204ENST00000463908 C3orf62Q6ZUJ4 267 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 CYS1Q717R9 158 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 IFT20Q8IY31 132 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms