RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 NIPA2Q8N8Q9 360 aa14.12□□□□□ -0.15
SMC1A-204ENST00000463684 CLEC1AQ8NC01 280 aa14.12□□□□□ -0.15
SMC1A-204ENST00000463684 FAM71BQ8TC56 605 aa14.12□□□□□ -0.15
SMC1A-204ENST00000463684 FER1L6-AS2Q96M78 137 aa14.12□□□□□ -0.15
SMC1A-204ENST00000463684 IP6K3Q96PC2 410 aa14.12□□□□□ -0.15
SMC1A-204ENST00000463684 SRPK1Q96SB4 655 aaKnown RBP14.12□□□□□ -0.15
SMC1A-204ENST00000463684 ZCCHC2Q9C0B9 1178 aaKnown RBP14.12□□□□□ -0.15
SMC1A-204ENST00000463684 ISCUQ9H1K1 167 aa14.12□□□□□ -0.15
SMC1A-204ENST00000463684 RUBCNLQ9H714 662 aa14.12□□□□□ -0.15
SMC1A-204ENST00000463684 AGPAT4Q9NRZ5 378 aa14.12□□□□□ -0.15
SMC1A-204ENST00000463684 IMP3Q9NV31 184 aaKnown RBP14.12□□□□□ -0.15
SMC1A-204ENST00000463684 MED13Q9UHV7 2174 aa14.12□□□□□ -0.15
SMC1A-204ENST00000463684 ARHGAP10A1A4S6 786 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 OR6C74A6NCV1 312 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 C9J4A7 227 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 KCNK1O00180 336 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 MAP3K7O43318 606 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 IGHEP01854 428 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 CYP2A7P20853 494 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 MYL5Q02045 173 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 DMPKQ09013 629 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 DPYSL3Q14195 570 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 PCSK7Q16549 785 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 ATP13A5Q4VNC0 1218 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 MAP7D3Q8IWC1 876 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 SYTL1Q8IYJ3 562 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 ZADH2Q8N4Q0 377 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 ZFPM2Q8WW38 1151 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 TM9SF4Q92544 642 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 HDAC11Q96DB2 347 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 BTBD6Q96KE9 485 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 ZNF830Q96NB3 372 aaPredicted RBP14.11□□□□□ -0.15
SMC1A-204ENST00000463684 TRIB3Q96RU7 358 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 DPH2Q9BQC3 489 aaPredicted RBP14.11□□□□□ -0.15
SMC1A-204ENST00000463684 TLR10Q9BXR5 811 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 ACTR5Q9H9F9 607 aaPredicted RBP14.11□□□□□ -0.15
SMC1A-204ENST00000463684 SYTL2Q9HCH5 934 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 BPIFA1Q9NP55 256 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 AIPL1Q9NZN9 384 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 SERTAD3Q9UJW9 196 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 ANAPC7Q9UJX3 599 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 TMPRSS11EQ9UL52 423 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 ENTPD4Q9Y227 616 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 BTRCQ9Y297 605 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 PADI2Q9Y2J8 665 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 DNMT3AQ9Y6K1 912 aaPredicted RBP14.11□□□□□ -0.15
SMC1A-204ENST00000463684 ABCA12Q86UK0 2595 aa14.11□□□□□ -0.15
SMC1A-204ENST00000463684 MYO1FO00160 1098 aa14.1□□□□□ -0.15
SMC1A-204ENST00000463684 LRRTM2O43300 516 aa14.1□□□□□ -0.15
SMC1A-204ENST00000463684 IPO13O94829 963 aaKnown RBP14.1□□□□□ -0.15
SMC1A-204ENST00000463684 CAPN1P07384 714 aa14.1□□□□□ -0.15
SMC1A-204ENST00000463684 MTHFD1P11586 935 aaKnown RBP14.1□□□□□ -0.15
SMC1A-204ENST00000463684 AGXTP21549 392 aa14.1□□□□□ -0.15
SMC1A-204ENST00000463684 CDH3P22223 829 aa14.1□□□□□ -0.15
SMC1A-204ENST00000463684 OTX2P32243 289 aa14.1□□□□□ -0.15
SMC1A-204ENST00000463684 RORAP35398 523 aa14.1□□□□□ -0.15
SMC1A-204ENST00000463684 GJC1P36383 396 aa14.1□□□□□ -0.15
SMC1A-204ENST00000463684 ARSEP51690 589 aa14.1□□□□□ -0.15
SMC1A-204ENST00000463684 KPNA2P52292 529 aaKnown RBP14.1□□□□□ -0.15
SMC1A-204ENST00000463684 PRKAA1Q13131 559 aa14.1□□□□□ -0.15
SMC1A-204ENST00000463684 NCF4Q15080 339 aa14.1□□□□□ -0.15
SMC1A-204ENST00000463684 PDK2Q15119 407 aa14.1□□□□□ -0.15
SMC1A-204ENST00000463684 SP5Q6BEB4 398 aaPredicted RBP14.1□□□□□ -0.15
SMC1A-204ENST00000463684 IGFL3Q6UXB1 125 aa14.1□□□□□ -0.15
SMC1A-204ENST00000463684 NT5DC3Q86UY8 548 aa14.1□□□□□ -0.15
SMC1A-204ENST00000463684 BEND7Q8N7W2 519 aaPredicted RBP14.1□□□□□ -0.15
SMC1A-204ENST00000463684 UBE2Q2Q8WVN8 375 aa14.1□□□□□ -0.15
SMC1A-204ENST00000463684 ZNF670Q9BS34 389 aa14.1□□□□□ -0.15
SMC1A-204ENST00000463684 CBX8Q9HC52 389 aa14.1□□□□□ -0.15
SMC1A-204ENST00000463684 PCMTD2Q9NV79 361 aa14.1□□□□□ -0.15
SMC1A-204ENST00000463684 CFAP20Q9Y6A4 193 aaKnown RBP14.1□□□□□ -0.15
SMC1A-204ENST00000463684 ANKRD17O75179 2603 aaKnown RBP14.1□□□□□ -0.15
SMC1A-204ENST00000463684 SLC9B1P1A6NJY1 282 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 TMEM150CB9EJG8 249 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 PEX12O00623 359 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 DDX3YO15523 660 aaKnown RBP14.09□□□□□ -0.15
SMC1A-204ENST00000463684 LCA5LO95447 670 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 HNRNPH3P31942 346 aaKnown RBP14.09□□□□□ -0.15
SMC1A-204ENST00000463684 HADHAP40939 763 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 PRKCIP41743 596 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 PREPP48147 710 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 ARCN1P48444 511 aaKnown RBP14.09□□□□□ -0.15
SMC1A-204ENST00000463684 GBE1Q04446 702 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 ABRQ12979 859 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 NFE2L1Q14494 772 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 KRT33BQ14525 404 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 SSPNQ14714 243 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 MYBPC3Q14896 1274 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 PTCHD3Q3KNS1 767 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 ATP13A4Q4VNC1 1196 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 LDLRAP1Q5SW96 308 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 METRNLQ641Q3 311 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 FBXO38Q6PIJ6 1188 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 TMEM220Q6QAJ8 160 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 FAM198BQ6UWH4 519 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 FAM83HQ6ZRV2 1179 aaPredicted RBP14.09□□□□□ -0.15
SMC1A-204ENST00000463684 APTXQ7Z2E3 356 aaKnown RBP14.09□□□□□ -0.15
SMC1A-204ENST00000463684 GALNT16Q8N428 558 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 CNTD1Q8N815 330 aa14.09□□□□□ -0.15
SMC1A-204ENST00000463684 RASGEF1AQ8N9B8 481 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms