RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	SARS2	Q9NP81	518 aa	Known RBP	12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	CASS4	Q9NQ75	786 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	NLE1	Q9NVX2	485 aa	Predicted RBP	12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	AKAP7	Q9P0M2	348 aa	Predicted RBP	12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	ZNF106	Q9H2Y7	1883 aa	Known RBP	12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	TCRBV7S3A2	A0A539	114 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	OR51F1	A6NGY5	319 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	PRR19	A6NJB7	356 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	GPR89A	B7ZAQ6	455 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	AP3B1	O00203	1094 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	EML2	O95834	649 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	ITGB2	P05107	769 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	GPR89B	P0CG08	455 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	PRSS56	P0CW18	603 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	CCL4	P13236	92 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	ZNF7	P17097	686 aa	Predicted RBP	12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	TPSB2	P20231	275 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	ADRA1D	P25100	572 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	MGAT1	P26572	445 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	ARSD	P51689	593 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	EPHA4	P54764	986 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	TPSAB1	Q15661	275 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	CYP1B1	Q16678	543 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	TMEM71	Q6P5X7	295 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	TMEM220	Q6QAJ8	160 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	USP53	Q70EK8	1073 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	SNX20	Q7Z614	316 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	ZFAND4	Q86XD8	727 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	TRIM48	Q8IWZ4	208 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	DDHD1	Q8NEL9	900 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	MED8	Q96G25	268 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	COPS8	Q99627	209 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	DDA1	Q9BW61	102 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	KCNK4	Q9NYG8	393 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	SAMD15	Q9P1V8	674 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	TMPRSS11E	Q9UL52	423 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507	TCAF1	Q9Y4C2	921 aa		12.49	□□□□□ -0.41
FDPS-204	ENST00000461507		B4E171	279 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	AGRP	O00253	132 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	GAPDHS	O14556	408 aa	Predicted RBP	12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	CHUK	O15111	745 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	DUX1	O43812	170 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	FGF3	P11487	239 aa	Predicted RBP	12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	SLC2A4	P14672	509 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	CA5A	P35218	305 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	TSPAN7	P41732	249 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	MAPK9	P45984	424 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	CTSC	P53634	463 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	MAPK10	P53779	464 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	XIAP	P98170	497 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	DR1	Q01658	176 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	CACNG1	Q06432	222 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	SRSF6	Q13247	344 aa	Known RBP	12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	TSTD2	Q5T7W7	516 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	TMEM164	Q5U3C3	297 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	NKAIN2	Q5VXU1	208 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	ANKRD22	Q5VYY1	191 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	AFTPH	Q6ULP2	937 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	XKR5	Q6UX68	686 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	SERPINA9	Q86WD7	417 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	ZNF761	Q86XN6	746 aa	Predicted RBP	12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	NXPE1	Q8N323	547 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	BEND7	Q8N7W2	519 aa	Predicted RBP	12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	BMPER	Q8N8U9	685 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	RASGEF1A	Q8N9B8	481 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	AVL9	Q8NBF6	648 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	AGBL5	Q8NDL9	886 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	RCBTB1	Q8NDN9	531 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	HDAC10	Q969S8	669 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	PMEPA1	Q969W9	287 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	SGF29	Q96ES7	293 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	CDKN2AIPNL	Q96HQ2	116 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	TAAR9	Q96RI9	348 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	TRIM31	Q9BZY9	425 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	PRDM8	Q9NQV8	689 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	SYBU	Q9NX95	663 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	TBC1D29	Q9UFV1	150 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	SLC2A6	Q9UGQ3	507 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	ANAPC5	Q9UJX4	755 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	PCDHGA4	Q9Y5G9	962 aa		12.48	□□□□□ -0.41
FDPS-204	ENST00000461507	KIR2DS5	A0A0G2JLQ3	304 aa		12.47	□□□□□ -0.41
FDPS-204	ENST00000461507		A0A0G2JNG1	304 aa		12.47	□□□□□ -0.41
FDPS-204	ENST00000461507	CCDC162P	A2VCL2	907 aa		12.47	□□□□□ -0.41
FDPS-204	ENST00000461507	LILRA5	A6NI73	299 aa		12.47	□□□□□ -0.41
FDPS-204	ENST00000461507	OR5K4	A6NMS3	321 aa		12.47	□□□□□ -0.41
FDPS-204	ENST00000461507	STMND1	H3BQB6	276 aa		12.47	□□□□□ -0.41
FDPS-204	ENST00000461507	KIR2DS3	K7RE56	304 aa		12.47	□□□□□ -0.41
FDPS-204	ENST00000461507	POP7	O75817	140 aa	Known RBP	12.47	□□□□□ -0.41
FDPS-204	ENST00000461507	GOT2	P00505	430 aa	Known RBP	12.47	□□□□□ -0.41
FDPS-204	ENST00000461507	F3	P13726	295 aa		12.47	□□□□□ -0.41
FDPS-204	ENST00000461507	IDS	P22304	550 aa		12.47	□□□□□ -0.41
FDPS-204	ENST00000461507	RPL10	P27635	214 aa	Known RBP	12.47	□□□□□ -0.41
FDPS-204	ENST00000461507	NPY2R	P49146	381 aa		12.47	□□□□□ -0.41
FDPS-204	ENST00000461507	CDKN1C	P49918	316 aa	Predicted RBP	12.47	□□□□□ -0.41
FDPS-204	ENST00000461507	DRG2	P55039	364 aa	Known RBP	12.47	□□□□□ -0.41
FDPS-204	ENST00000461507	ETF1	P62495	437 aa	Known RBP	12.47	□□□□□ -0.41
FDPS-204	ENST00000461507	HHEX	Q03014	270 aa		12.47	□□□□□ -0.41
FDPS-204	ENST00000461507	MSLN	Q13421	630 aa	Predicted RBP	12.47	□□□□□ -0.41
FDPS-204	ENST00000461507	LY6D	Q14210	128 aa		12.47	□□□□□ -0.41
FDPS-204	ENST00000461507	KCNJ11	Q14654	390 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms