RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 FAM129CQ86XR2 697 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 CDKN2AIPNLQ96HQ2 116 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 TAAR9Q96RI9 348 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 OSBPL9Q96SU4 736 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 B3GNT4Q9C0J1 378 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 VPS37BQ9H9H4 285 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 CASS4Q9NQ75 786 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 EIF2B3Q9NR50 452 aaKnown RBP15.09■□□□□ 0.01
VARS-219ENST00000461328 ZDHHC3Q9NYG2 299 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 ZNF624Q9P2J8 865 aaPredicted RBP15.09■□□□□ 0.01
VARS-219ENST00000461328 TTC7AQ9ULT0 858 aaPredicted RBP15.09■□□□□ 0.01
VARS-219ENST00000461328 PSMD13Q9UNM6 376 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 SSUH2Q9Y2M2 353 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 PCDHB11Q9Y5F2 797 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 DNMT3AQ9Y6K1 912 aaPredicted RBP15.09■□□□□ 0.01
VARS-219ENST00000461328 BPTFQ12830 3046 aa15.09■□□□□ 0.01
VARS-219ENST00000461328 LOC400499M0QZD8 3231 aa15.08■□□□□ 0.01
VARS-219ENST00000461328 MGAT4DA6NG13 374 aa15.08■□□□□ 0
VARS-219ENST00000461328 MROH6A6NGR9 719 aa15.08■□□□□ 0
VARS-219ENST00000461328 OR51F1A6NGY5 319 aa15.08■□□□□ 0
VARS-219ENST00000461328 PRR19A6NJB7 356 aa15.08■□□□□ 0
VARS-219ENST00000461328 EFCAB7A8K855 629 aa15.08■□□□□ 0
VARS-219ENST00000461328 H7C0S8 307 aa15.08■□□□□ 0
VARS-219ENST00000461328 K7ENP7 123 aa15.08■□□□□ 0
VARS-219ENST00000461328 PRSS56P0CW18 603 aa15.08■□□□□ 0
VARS-219ENST00000461328 ATP1B2P14415 290 aaPredicted RBP15.08■□□□□ 0
VARS-219ENST00000461328 BRAFP15056 766 aa15.08■□□□□ 0
VARS-219ENST00000461328 AMD1P17707 334 aa15.08■□□□□ 0
VARS-219ENST00000461328 XRCC1P18887 633 aaPredicted RBP15.08■□□□□ 0
VARS-219ENST00000461328 ADRA1DP25100 572 aa15.08■□□□□ 0
VARS-219ENST00000461328 CD82P27701 267 aa15.08■□□□□ 0
VARS-219ENST00000461328 SLC19A1P41440 591 aa15.08■□□□□ 0
VARS-219ENST00000461328 CDKN1CP49918 316 aaPredicted RBP15.08■□□□□ 0
VARS-219ENST00000461328 DMPKQ09013 629 aa15.08■□□□□ 0
VARS-219ENST00000461328 BCL7AQ4VC05 210 aa15.08■□□□□ 0
VARS-219ENST00000461328 INO80CQ6PI98 192 aaPredicted RBP15.08■□□□□ 0
VARS-219ENST00000461328 AFTPHQ6ULP2 937 aa15.08■□□□□ 0
VARS-219ENST00000461328 WASH2PQ6VEQ5 465 aa15.08■□□□□ 0
VARS-219ENST00000461328 FAM83HQ6ZRV2 1179 aaPredicted RBP15.08■□□□□ 0
VARS-219ENST00000461328 TMEM26Q6ZUK4 368 aa15.08■□□□□ 0
VARS-219ENST00000461328 MICALCLQ6ZW33 695 aa15.08■□□□□ 0
VARS-219ENST00000461328 RASGEF1CQ8N431 466 aa15.08■□□□□ 0
VARS-219ENST00000461328 ART4Q93070 314 aa15.08■□□□□ 0
VARS-219ENST00000461328 PDLIM2Q96JY6 352 aa15.08■□□□□ 0
VARS-219ENST00000461328 UCK1Q9HA47 277 aa15.08■□□□□ 0
VARS-219ENST00000461328 WASH6PQ9NQA3 447 aa15.08■□□□□ 0
VARS-219ENST00000461328 IMP3Q9NV31 184 aaKnown RBP15.08■□□□□ 0
VARS-219ENST00000461328 SLC39A1Q9NY26 324 aa15.08■□□□□ 0
VARS-219ENST00000461328 SMARCAL1Q9NZC9 954 aa15.08■□□□□ 0
VARS-219ENST00000461328 PDP2Q9P2J9 529 aa15.08■□□□□ 0
VARS-219ENST00000461328 KLHL3Q9UH77 587 aa15.08■□□□□ 0
VARS-219ENST00000461328 WDR37Q9Y2I8 494 aa15.08■□□□□ 0
VARS-219ENST00000461328 TCAF1Q9Y4C2 921 aa15.08■□□□□ 0
VARS-219ENST00000461328 CCDC162PA2VCL2 907 aa15.07■□□□□ 0
VARS-219ENST00000461328 KLHL33A6NCF5 533 aa15.07■□□□□ 0
VARS-219ENST00000461328 AGAP14A8MT82 685 aa15.07■□□□□ 0
VARS-219ENST00000461328 ATXN7O15265 892 aaPredicted RBP15.07■□□□□ 0
VARS-219ENST00000461328 SLC35G4P0C7Q5 338 aa15.07■□□□□ 0
VARS-219ENST00000461328 TYRP1P17643 537 aa15.07■□□□□ 0
VARS-219ENST00000461328 PRLHRP49683 370 aa15.07■□□□□ 0
VARS-219ENST00000461328 ARSDP51689 593 aa15.07■□□□□ 0
VARS-219ENST00000461328 PRAMEP78395 509 aa15.07■□□□□ 0
VARS-219ENST00000461328 RHDQ02161 417 aa15.07■□□□□ 0
VARS-219ENST00000461328 GPS1Q13098 491 aa15.07■□□□□ 0
VARS-219ENST00000461328 CLCA4Q14CN2 919 aa15.07■□□□□ 0
VARS-219ENST00000461328 DBN1Q16643 649 aa15.07■□□□□ 0
VARS-219ENST00000461328 KCTD19Q17RG1 926 aaPredicted RBP15.07■□□□□ 0
VARS-219ENST00000461328 MANEAQ5SRI9 462 aa15.07■□□□□ 0
VARS-219ENST00000461328 TSTD2Q5T7W7 516 aa15.07■□□□□ 0
VARS-219ENST00000461328 NLRP9Q7RTR0 991 aa15.07■□□□□ 0
VARS-219ENST00000461328 PLXDC1Q8IUK5 500 aa15.07■□□□□ 0
VARS-219ENST00000461328 RBM12BQ8IXT5 1001 aaKnown RBP15.07■□□□□ 0
VARS-219ENST00000461328 OR6P1Q8NGX9 317 aa15.07■□□□□ 0
VARS-219ENST00000461328 OR2L2Q8NH16 312 aa15.07■□□□□ 0
VARS-219ENST00000461328 HM13Q8TCT9 377 aa15.07■□□□□ 0
VARS-219ENST00000461328 COG1Q8WTW3 980 aa15.07■□□□□ 0
VARS-219ENST00000461328 SLC39A7Q92504 469 aa15.07■□□□□ 0
VARS-219ENST00000461328 RANBP9Q96S59 729 aa15.07■□□□□ 0
VARS-219ENST00000461328 TTC1Q99614 292 aa15.07■□□□□ 0
VARS-219ENST00000461328 WWP1Q9H0M0 922 aa15.07■□□□□ 0
VARS-219ENST00000461328 OCIAD1Q9NX40 245 aa15.07■□□□□ 0
VARS-219ENST00000461328 SLC2A6Q9UGQ3 507 aa15.07■□□□□ 0
VARS-219ENST00000461328 SNX12Q9UMY4 172 aa15.07■□□□□ 0
VARS-219ENST00000461328 PCDHGA3Q9Y5H0 932 aa15.07■□□□□ 0
VARS-219ENST00000461328 TRBV5-4A0A0C4DH59 114 aa15.06■□□□□ 0
VARS-219ENST00000461328 USP27XA6NNY8 438 aa15.06■□□□□ 0
VARS-219ENST00000461328 B4E171 279 aa15.06■□□□□ 0
VARS-219ENST00000461328 STMND1H3BQB6 276 aa15.06■□□□□ 0
VARS-219ENST00000461328 ERVH48-1M5A8F1 160 aa15.06■□□□□ 0
VARS-219ENST00000461328 AP3B1O00203 1094 aa15.06■□□□□ 0
VARS-219ENST00000461328 UBXN7O94888 489 aa15.06■□□□□ 0
VARS-219ENST00000461328 KRT14P02533 472 aa15.06■□□□□ 0
VARS-219ENST00000461328 POLBP06746 335 aa15.06■□□□□ 0
VARS-219ENST00000461328 TSPAN7P41732 249 aa15.06■□□□□ 0
VARS-219ENST00000461328 RAB15P59190 212 aa15.06■□□□□ 0
VARS-219ENST00000461328 GPR18Q14330 331 aa15.06■□□□□ 0
VARS-219ENST00000461328 GSE1Q14687 1217 aa15.06■□□□□ 0
VARS-219ENST00000461328 PLCL1Q15111 1095 aa15.06■□□□□ 0
VARS-219ENST00000461328 TAF1BQ53T94 588 aaPredicted RBP15.06■□□□□ 0
VARS-219ENST00000461328 DCAF12Q5T6F0 453 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 989.5 ms