RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 COCHO43405 550 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 CLDN7O95471 211 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 CATP04040 527 aaKnown RBP11.48□□□□□ -0.57
NPHP4-204ENST00000460696 HOXD8P13378 290 aaPredicted RBP11.48□□□□□ -0.57
NPHP4-204ENST00000460696 PSMB9P28065 219 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 SPAM1P38567 509 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 OR4D1Q15615 310 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 NADK2Q4G0N4 442 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 XKR6Q5GH73 641 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 PSAPL1Q6NUJ1 521 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 ZCCHC8Q6NZY4 707 aaKnown RBP11.48□□□□□ -0.57
NPHP4-204ENST00000460696 GET4Q7L5D6 327 aaPredicted RBP11.48□□□□□ -0.57
NPHP4-204ENST00000460696 RNF168Q8IYW5 571 aaPredicted RBP11.48□□□□□ -0.57
NPHP4-204ENST00000460696 C8orf59Q8N0T1 100 aaPredicted RBP11.48□□□□□ -0.57
NPHP4-204ENST00000460696 PLD4Q96BZ4 506 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 CENPNQ96H22 339 aaPredicted RBP11.48□□□□□ -0.57
NPHP4-204ENST00000460696 RTP3Q9BQQ7 232 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 CHID1Q9BWS9 393 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 IGSF5Q9NSI5 407 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 IMPAD1Q9NX62 359 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 NUDT4Q9NZJ9 180 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 DNAJC15Q9Y5T4 150 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 DOCK3Q8IZD9 2030 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 HHLA1C9JL84 531 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 MTX2O75431 263 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 CLIC3O95833 236 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 DNAJB1P25685 340 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 CPOXP36551 454 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 ALDH9A1P49189 494 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 GSK3BP49841 420 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 CDKN1CP49918 316 aaPredicted RBP11.48□□□□□ -0.57
NPHP4-204ENST00000460696 ERVK-8P63133 956 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 SLC2A7Q6PXP3 512 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 ADHFE1Q8IWW8 467 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 COLGALT2Q8IYK4 626 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 PTERQ96BW5 349 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 CEP19Q96LK0 163 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 ADI1Q9BV57 179 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 IRAK4Q9NWZ3 460 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 SUCOQ9UBS9 1254 aaKnown RBP11.48□□□□□ -0.57
NPHP4-204ENST00000460696 TMCO1Q9UM00 188 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 DYRK1BQ9Y463 629 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 PCNTO95613 3336 aa11.48□□□□□ -0.57
NPHP4-204ENST00000460696 PRORSD1PA6NEY8 169 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 RECQL5O94762 991 aaPredicted RBP11.47□□□□□ -0.57
NPHP4-204ENST00000460696 AQP1P29972 269 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 CHI3L1P36222 383 aaPredicted RBP11.47□□□□□ -0.57
NPHP4-204ENST00000460696 NAA20P61599 178 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 CAMK2GQ13555 558 aaPredicted RBP11.47□□□□□ -0.57
NPHP4-204ENST00000460696 TLR1Q15399 786 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 SHHQ15465 462 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 CWF19L1Q69YN2 538 aaKnown RBP11.47□□□□□ -0.57
NPHP4-204ENST00000460696 KBTBD6Q86V97 674 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 PARP8Q8N3A8 854 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 GLMNQ92990 594 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 ARPC2O15144 300 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 CCL16O15467 120 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 BCL10O95999 233 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 RPS9P46781 194 aaKnown RBP11.47□□□□□ -0.57
NPHP4-204ENST00000460696 NRIP1P48552 1158 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 AP1S1P61966 158 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 TGFBIQ15582 683 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 SETMARQ53H47 684 aaPredicted RBP11.47□□□□□ -0.57
NPHP4-204ENST00000460696 CES4AQ5XG92 561 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 DOK6Q6PKX4 331 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 GALNT15Q8N3T1 639 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 B4GALNT2Q8NHY0 566 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 UTP15Q8TED0 518 aaKnown RBP11.47□□□□□ -0.57
NPHP4-204ENST00000460696 OSGEPL1Q9H4B0 414 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 PLAC1Q9HBJ0 212 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 EXOSC4Q9NPD3 245 aaKnown RBP11.47□□□□□ -0.57
NPHP4-204ENST00000460696 MAGEL2Q9UJ55 1249 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 SPO11Q9Y5K1 396 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 SNX8Q9Y5X2 465 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 A0A1W2PRU2 124 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 EPN2O95208 641 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 SLC26A3P40879 764 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 MTHFRP42898 656 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 RFTN1Q14699 578 aaPredicted RBP11.47□□□□□ -0.57
NPHP4-204ENST00000460696 ZNF423Q2M1K9 1284 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 PIGGQ5H8A4 983 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 TTC23Q5W5X9 447 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 C11orf74Q86VG3 221 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 LIX1Q8N485 282 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 SMG7Q92540 1137 aaKnown RBP11.47□□□□□ -0.57
NPHP4-204ENST00000460696 TIFAQ96CG3 184 aa11.47□□□□□ -0.57
NPHP4-204ENST00000460696 TDRKHQ9Y2W6 561 aaKnown RBP11.47□□□□□ -0.57
NPHP4-204ENST00000460696 KDELR3O43731 214 aa11.46□□□□□ -0.57
NPHP4-204ENST00000460696 ADAMTS4O75173 837 aa11.46□□□□□ -0.57
NPHP4-204ENST00000460696 GPIP06744 558 aa11.46□□□□□ -0.57
NPHP4-204ENST00000460696 FESP07332 822 aa11.46□□□□□ -0.57
NPHP4-204ENST00000460696 CYP4B1P13584 511 aa11.46□□□□□ -0.57
NPHP4-204ENST00000460696 ARCN1P48444 511 aaKnown RBP11.46□□□□□ -0.57
NPHP4-204ENST00000460696 LSM3P62310 102 aaKnown RBP11.46□□□□□ -0.57
NPHP4-204ENST00000460696 TRAP1Q12931 704 aaKnown RBP11.46□□□□□ -0.57
NPHP4-204ENST00000460696 CHRNA6Q15825 494 aa11.46□□□□□ -0.57
NPHP4-204ENST00000460696 DENND5AQ6IQ26 1287 aa11.46□□□□□ -0.57
NPHP4-204ENST00000460696 CNKSR3Q6P9H4 555 aa11.46□□□□□ -0.57
NPHP4-204ENST00000460696 ARHGAP22Q7Z5H3 698 aa11.46□□□□□ -0.57
NPHP4-204ENST00000460696 ADGRG6Q86SQ4 1221 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms