RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 POM121Q96HA1 1249 aa14.03□□□□□ -0.16
UPF3AP2-201ENST00000457924 VPS35Q96QK1 796 aa14.03□□□□□ -0.16
UPF3AP2-201ENST00000457924 TUBB2BQ9BVA1 445 aa14.03□□□□□ -0.16
UPF3AP2-201ENST00000457924 XPO4Q9C0E2 1151 aaKnown RBP14.03□□□□□ -0.16
UPF3AP2-201ENST00000457924 SNX7Q9UNH6 387 aa14.03□□□□□ -0.16
UPF3AP2-201ENST00000457924 SSU72P8A0A1W2PR75 194 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 TLCD2A6NGC4 264 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 BPIP17213 487 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 COL8A1P27658 744 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 DCTP40126 519 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 GSDMDP57764 484 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 TMEM115Q12893 351 aaPredicted RBP14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 GPS2Q13227 327 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 PCSK7Q16549 785 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 FILIP1LQ4L180 1135 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 KHDC1Q4VXA5 237 aaKnown RBP14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 TMTC4Q5T4D3 741 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 CCDC70Q6NSX1 233 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 CERS6Q6ZMG9 384 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 ZNF517Q6ZMY9 492 aaPredicted RBP14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 AMZ2Q86W34 360 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 TTC30BQ8N4P2 665 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 CNTD1Q8N815 330 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 Q8NA96 180 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 FDCSPQ8NFU4 85 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 GPR150Q8NGU9 434 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 BRSK1Q8TDC3 778 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 TRIB3Q96RU7 358 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 SRPK1Q96SB4 655 aaKnown RBP14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 CHST8Q9H2A9 424 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 KCND1Q9NSA2 647 aa14.02□□□□□ -0.17
UPF3AP2-201ENST00000457924 OR5K3A6NET4 321 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 ZNF185O15231 689 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 ZBTB11O95625 1053 aaPredicted RBP14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 CLDN1O95832 211 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 IFI35P80217 286 aaPredicted RBP14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 CDK18Q07002 472 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 PPIDQ08752 370 aaKnown RBP14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 SLC10A2Q12908 348 aaPredicted RBP14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 ZBTB17Q13105 803 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 GPR19Q15760 415 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 RPE65Q16518 533 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 ZFYVE27Q5T4F4 411 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 SLC6A19Q695T7 634 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 MED25Q71SY5 747 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 NT5DC3Q86UY8 548 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 PQLC3Q8N755 202 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 ENDOVQ8N8Q3 282 aaKnown RBP14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 TMEM102Q8N9M5 508 aaPredicted RBP14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 ADAMTS17Q8TE56 1095 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 FAF2Q96CS3 445 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 ZNF501Q96CX3 271 aaPredicted RBP14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 IMP4Q96G21 291 aaKnown RBP14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 LRFN5Q96NI6 719 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 NUDT9Q9BW91 350 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 CBX8Q9HC52 389 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 BPIFA1Q9NP55 256 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 LMBRD1Q9NUN5 540 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 HRASLS2Q9NWW9 162 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 GPR83Q9NYM4 423 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 PSMD13Q9UNM6 376 aa14.01□□□□□ -0.17
UPF3AP2-201ENST00000457924 WIPF3A6NGB9 483 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 A6NL46 340 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 MEN1O00255 615 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 POP7O75817 140 aaKnown RBP14□□□□□ -0.17
UPF3AP2-201ENST00000457924 CYP1A2P05177 515 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 RAB40ALP0C0E4 278 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 VAV2P52735 878 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 RRADP55042 308 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 DMPKQ09013 629 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 AP1B1Q10567 949 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 ATP13A5Q4VNC0 1218 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 ARMC6Q6NXE6 501 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 OOSP2Q86WS3 158 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 CARFQ8N187 725 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 RBMXL3Q8N7X1 1067 aaKnown RBP14□□□□□ -0.17
UPF3AP2-201ENST00000457924 SLC38A9Q8NBW4 561 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 CPT1BQ92523 772 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 CLIP3Q96DZ5 547 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 NLNQ9BYT8 704 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 ZCCHC2Q9C0B9 1178 aaKnown RBP14□□□□□ -0.17
UPF3AP2-201ENST00000457924 FANCEQ9HB96 536 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 LATS2Q9NRM7 1088 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 IMP3Q9NV31 184 aaKnown RBP14□□□□□ -0.17
UPF3AP2-201ENST00000457924 SOHLH2Q9NX45 425 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 ERRFI1Q9UJM3 462 aaPredicted RBP14□□□□□ -0.17
UPF3AP2-201ENST00000457924 TCFL5Q9UL49 500 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 TMPRSS11EQ9UL52 423 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 GTF3C3Q9Y5Q9 886 aa14□□□□□ -0.17
UPF3AP2-201ENST00000457924 BZW2Q9Y6E2 419 aaKnown RBP14□□□□□ -0.17
UPF3AP2-201ENST00000457924 LDLRP01130 860 aa13.99□□□□□ -0.17
UPF3AP2-201ENST00000457924 MTHFD1P11586 935 aaKnown RBP13.99□□□□□ -0.17
UPF3AP2-201ENST00000457924 ITGA1P56199 1179 aa13.99□□□□□ -0.17
UPF3AP2-201ENST00000457924 XRCC4Q13426 336 aa13.99□□□□□ -0.17
UPF3AP2-201ENST00000457924 PLEKHS1Q5SXH7 462 aa13.99□□□□□ -0.17
UPF3AP2-201ENST00000457924 DSELQ8IZU8 1212 aa13.99□□□□□ -0.17
UPF3AP2-201ENST00000457924 IQCKQ8N0W5 287 aa13.99□□□□□ -0.17
UPF3AP2-201ENST00000457924 GLIS1Q8NBF1 620 aa13.99□□□□□ -0.17
UPF3AP2-201ENST00000457924 C19orf60Q96EN9 201 aa13.99□□□□□ -0.17
UPF3AP2-201ENST00000457924 TCTN2Q96GX1 697 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms