RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 EIF4A2Q14240 407 aaKnown RBP3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 MVPQ14764 893 aaKnown RBP3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 PCGF3Q3KNV8 242 aa3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 NDUFAF5Q5TEU4 345 aa3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 FAAH2Q6GMR7 532 aa3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 GET4Q7L5D6 327 aaPredicted RBP3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 TBC1D1Q86TI0 1168 aaPredicted RBP3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 PTOV1Q86YD1 416 aa3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 OR8H2Q8N162 312 aa3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 HCAR2Q8TDS4 363 aa3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 SNRNP27Q8WVK2 155 aaKnown RBP3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 TMEM190Q8WZ59 177 aa3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 SMPDL3BQ92485 455 aa3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 SLX1AQ9BQ83 275 aa3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 RAD21L1Q9H4I0 556 aa3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 TRMT1Q9NXH9 659 aaKnown RBP3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 B3GALT5Q9Y2C3 310 aa3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 PIAS3Q9Y6X2 628 aa3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 COL2A1P02458 1487 aaPredicted RBP3.35□□□□□ -1.87
R3HDM1-212ENST00000456040 IGKV3D-15A0A087WSY6 115 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 J3QR06 171 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 PSMD14O00487 310 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 SYNCRIPO60506 623 aaKnown RBP3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 GFPT2O94808 682 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 TSHBP01222 138 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 ZNF883P0CG24 379 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 IGHV4-38-2P0DP08 117 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 GNB3P16520 340 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 CHMP24386 653 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 HOXA13P31271 388 aaPredicted RBP3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 NOVP48745 357 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 MEP1AQ16819 746 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 SPECC1Q5M775 1068 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 ZDHHC20Q5W0Z9 365 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 ZNF534Q76KX8 674 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 PXKQ7Z7A4 578 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 ZNF485Q8NCK3 441 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 TAF15Q92804 592 aaKnown RBP eCLIP3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 ELMOD3Q96FG2 381 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 SERINC2Q96SA4 455 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 GFI1Q99684 422 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 BARD1Q99728 777 aaKnown RBP3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 ASCL2Q99929 193 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 PSD2Q9BQI7 771 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 ALDH8A1Q9H2A2 487 aaPredicted RBP3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 MUC13Q9H3R2 512 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 SH2D4AQ9H788 454 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 ECHDC1Q9NTX5 307 aa3.34□□□□□ -1.87
R3HDM1-212ENST00000456040 TDRD9Q8NDG6 1382 aaKnown RBP3.34□□□□□ -1.88
R3HDM1-212ENST00000456040 IGKV3D-20A0A0C4DH25 116 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 A0A1W2PRQ8 180 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 OR2M5A3KFT3 312 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 TMEM8BA6NDV4 472 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 B4E171 279 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 TMEM189-UBE2V1I3L0A0 370 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 TBX18O95935 607 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 IGLV1-44P01699 117 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 PLA2G4BP0C869 781 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 ARL3P36405 182 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 PPARGP37231 505 aaPredicted RBP3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 TSPAN7P41732 249 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 MMP15P51511 669 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 GAGE2BQ13066 116 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 UBE2V1Q13404 147 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 GAGE2EQ4V326 116 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 ZC2HC1BQ5TFG8 222 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 GKAP1Q5VSY0 366 aaPredicted RBP3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 JADE1Q6IE81 842 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 FAM53AQ6NSI3 398 aaPredicted RBP3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 GAGE2AQ6NT46 116 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 KLHL35Q6PF15 583 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 FASTKD5Q7L8L6 764 aaKnown RBP3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 TICAM1Q8IUC6 712 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 HJURPQ8NCD3 748 aaPredicted RBP3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 WDR20Q8TBZ3 569 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 HDAC2Q92769 488 aaKnown RBP3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 EGLN1Q9GZT9 426 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 SEMA6AQ9H2E6 1030 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 KAT14Q9H8E8 782 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 SETD4Q9NVD3 440 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 INTS10Q9NVR2 710 aaKnown RBP3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 C2orf42Q9NWW7 574 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 PTTG2Q9NZH5 202 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 OGFRQ9NZT2 677 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 ORC3Q9UBD5 711 aaPredicted RBP3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 GAGE2DQ9UEU5 116 aa3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 CORO1CQ9ULV4 474 aaPredicted RBP3.33□□□□□ -1.88
R3HDM1-212ENST00000456040 A6NL46 340 aa3.32□□□□□ -1.88
R3HDM1-212ENST00000456040 MYO1GB0I1T2 1018 aa3.32□□□□□ -1.88
R3HDM1-212ENST00000456040 K7ENM7 598 aa3.32□□□□□ -1.88
R3HDM1-212ENST00000456040 NR5A2O00482 541 aa3.32□□□□□ -1.88
R3HDM1-212ENST00000456040 HS6ST1O60243 411 aa3.32□□□□□ -1.88
R3HDM1-212ENST00000456040 GPR137BO60478 399 aa3.32□□□□□ -1.88
R3HDM1-212ENST00000456040 SRPRAP08240 638 aaKnown RBP3.32□□□□□ -1.88
R3HDM1-212ENST00000456040 CD48P09326 243 aa3.32□□□□□ -1.88
R3HDM1-212ENST00000456040 LAMP2P13473 410 aa3.32□□□□□ -1.88
R3HDM1-212ENST00000456040 RARGP13631 454 aa3.32□□□□□ -1.88
R3HDM1-212ENST00000456040 SELLP14151 372 aa3.32□□□□□ -1.88
R3HDM1-212ENST00000456040 MFAP5Q13361 173 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms