RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 DGKAP23743 735 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 YBX1P67809 324 aaKnown RBP11.8□□□□□ -0.52
SMPD4-213ENST00000454468 EIF4EBP2Q13542 120 aaPredicted RBP11.8□□□□□ -0.52
SMPD4-213ENST00000454468 NEDD8Q15843 81 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 TTLL9Q3SXZ7 439 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 ADAMTSL2Q86TH1 951 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 LMNTD1Q8N9Z9 388 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 CD200R1Q8TD46 325 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 ELMO1Q92556 727 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 ABTB1Q969K4 478 aaPredicted RBP11.8□□□□□ -0.52
SMPD4-213ENST00000454468 ASB2Q96Q27 587 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 EBPLQ9BY08 206 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 DERL2Q9GZP9 239 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 VCX3AQ9NNX9 186 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 OAZ3Q9UMX2 235 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 CLOCKO15516 846 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 ESRRBO95718 433 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 ESR1P03372 595 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 SOD2P04179 222 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 CCL5P13501 91 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 HOXB8P17481 243 aaPredicted RBP11.8□□□□□ -0.52
SMPD4-213ENST00000454468 RPIAP49247 311 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 VEGFBP49765 207 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 GSK3BP49841 420 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 NTHL1P78549 312 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 MRPL58Q14197 206 aaKnown RBP11.8□□□□□ -0.52
SMPD4-213ENST00000454468 ABRAXAS2Q15018 415 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 MAPKAPK3Q16644 382 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 CTSL3PQ5NE16 218 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 C6orf136Q5SQH8 315 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 LRRC66Q68CR7 880 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 CWF19L1Q69YN2 538 aaKnown RBP11.8□□□□□ -0.52
SMPD4-213ENST00000454468 CXorf57Q6NSI4 855 aaKnown RBP11.8□□□□□ -0.52
SMPD4-213ENST00000454468 TRAF7Q6Q0C0 670 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 GOLGA7Q7Z5G4 137 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 PARP8Q8N3A8 854 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 OR10A6Q8NH74 314 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 LKAAEAR1Q8TD35 194 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 ASAH2Q9NR71 780 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 FNIP2Q9P278 1114 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 GNPTGQ9UJJ9 305 aa11.8□□□□□ -0.52
SMPD4-213ENST00000454468 TRAV19A0A0A6YYK7 116 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 ANKRD33BA6NCL7 494 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 TNFAIP8O95379 198 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 MAP4P27816 1152 aaKnown RBP11.79□□□□□ -0.52
SMPD4-213ENST00000454468 HK3P52790 923 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 LAPTM5Q13571 262 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 LRP8Q14114 963 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 GLYATQ6IB77 296 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 OR52E8Q6IFG1 317 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 UBE2R2Q712K3 238 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-213ENST00000454468 STK40Q8N2I9 435 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 RNF175Q8N4F7 328 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 GPR156Q8NFN8 814 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 SNX19Q92543 992 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 APOLD1Q96LR9 279 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 WRAP53Q9BUR4 548 aaKnown RBP11.79□□□□□ -0.52
SMPD4-213ENST00000454468 UBAP1Q9NZ09 502 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 WARS2Q9UGM6 360 aaKnown RBP11.79□□□□□ -0.52
SMPD4-213ENST00000454468 SLC25A13Q9UJS0 675 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 LEF1Q9UJU2 399 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-213ENST00000454468 LOC730098B7Z3J9 87 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 ARPC2O15144 300 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 AHCYL1O43865 530 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 FKBP9O95302 570 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 ADSLP30566 484 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-213ENST00000454468 SNRPD1P62314 119 aaKnown RBP11.79□□□□□ -0.52
SMPD4-213ENST00000454468 ESRRGP62508 458 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 RHDQ02161 417 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 STARD3Q14849 445 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 CNPY1Q3B7I2 92 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 CACHD1Q5VU97 1274 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 FKBP9P1Q75LS8 142 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 SZRD1Q7Z422 152 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 PHACTR4Q8IZ21 702 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 ZBTB2Q8N680 514 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 KRTCAP2Q8N6L1 136 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 ADCY4Q8NFM4 1077 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 PAWRQ96IZ0 340 aaKnown RBP11.79□□□□□ -0.52
SMPD4-213ENST00000454468 TCF12Q99081 682 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 LINC00597Q9H2U6 94 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 IL26Q9NPH9 171 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 BAG5Q9UL15 447 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 VPS4AQ9UN37 437 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 WNT6Q9Y6F9 365 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 LIN7AO14910 233 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-213ENST00000454468 HSPA1AP0DMV8 641 aaKnown RBP11.79□□□□□ -0.52
SMPD4-213ENST00000454468 HSPA1BP0DMV9 641 aaKnown RBP11.79□□□□□ -0.52
SMPD4-213ENST00000454468 GPX3P22352 226 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 OXTRP30559 389 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 ROR2Q01974 943 aaKnown RBP11.79□□□□□ -0.52
SMPD4-213ENST00000454468 RFTN2Q52LD8 501 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-213ENST00000454468 SLC8B1Q6J4K2 584 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 TMEM25Q86YD3 366 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 TSPAN14Q8NG11 270 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 HMGCLL1Q8TB92 370 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 ITFG1Q8TB96 612 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 RMND5BQ96G75 393 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-213ENST00000454468 CCDC138Q96M89 665 aa11.79□□□□□ -0.52
SMPD4-213ENST00000454468 BIRC8Q96P09 236 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms