RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 PQLC3Q8N755 202 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 ENDOVQ8N8Q3 282 aaKnown RBP13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 DDHD1Q8NEL9 900 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 FDCSPQ8NFU4 85 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 GDAP1Q8TB36 358 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 PRR7Q8TB68 274 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 TM9SF4Q92544 642 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 IQCDQ96DY2 449 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 RUFY1Q96T51 708 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 BPIFA3Q9BQP9 254 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 CHST8Q9H2A9 424 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 AKIRIN1Q9H9L7 192 aaPredicted RBP13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 LMBRD1Q9NUN5 540 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 HACD3Q9P035 362 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 ACSL5Q9ULC5 683 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 TNRC6AQ8NDV7 1962 aaKnown RBP13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 A0A1W2PQJ5 194 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 PPP1R12AO14974 1030 aaPredicted RBP13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 MTX2O75431 263 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 IPO13O94829 963 aaKnown RBP13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 PROSCO94903 275 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 CBX6O95503 412 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 EPOP01588 193 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 HBQ1P09105 142 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 NDUFS1P28331 727 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 RORAP35398 523 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 TNNT3P45378 269 aaPredicted RBP13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 PPP1CAP62136 330 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 ZBTB17Q13105 803 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 MRPL49Q13405 166 aaKnown RBP13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 LONRF2Q1L5Z9 754 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 PLEKHS1Q5SXH7 462 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 HGSNATQ68CP4 663 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 RBMXL3Q8N7X1 1067 aaKnown RBP13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 TTC13Q8NBP0 860 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 GPR150Q8NGU9 434 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 SGSM3Q96HU1 749 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 BTBD6Q96KE9 485 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 NUDT9Q9BW91 350 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 KIR3DX1Q9H7L2 352 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 C1GALT1Q9NS00 363 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 SMOXQ9NWM0 555 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 UVRAGQ9P2Y5 699 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 ERRFI1Q9UJM3 462 aaPredicted RBP13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 B3GNT3Q9Y2A9 372 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 CELSR2Q9HCU4 2923 aa13.94□□□□□ -0.18
LYSMD3-202ENST00000453259 A0A1B0GTH6 734 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 C9J4A7 227 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 POP7O75817 140 aaKnown RBP13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 CLDN1O95832 211 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 SLC4A1P02730 911 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 SERPING1P05155 500 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 PIRTP0C851 137 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 SKILP12757 684 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 ZFXP17010 805 aaPredicted RBP13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 SLC10A2Q12908 348 aaPredicted RBP13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 PRKAA1Q13131 559 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 XRCC4Q13426 336 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 ELOAQ14241 798 aaKnown RBP13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 GPR19Q15760 415 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 LYPLAL1Q5VWZ2 237 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 ZNF787Q6DD87 383 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 SLC38A9Q8NBW4 561 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 CLIP3Q96DZ5 547 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 RNF31Q96EP0 1072 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 FER1L6-AS2Q96M78 137 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 RNF157Q96PX1 679 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 IL26Q9NPH9 171 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 IMP3Q9NV31 184 aaKnown RBP13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 SOHLH2Q9NX45 425 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 TRIM10Q9UDY6 481 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 SLC24A2Q9UI40 661 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 TMPRSS11EQ9UL52 423 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 HEBP2Q9Y5Z4 205 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 COLEC10Q9Y6Z7 277 aa13.93□□□□□ -0.18
LYSMD3-202ENST00000453259 SMTNL1A8MU46 457 aa13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 SLC35G4P0C7Q5 338 aa13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 SPAM1P38567 509 aa13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 ITGA1P56199 1179 aa13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 AP1B1Q10567 949 aa13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 NCF4Q15080 339 aa13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 PCSK7Q16549 785 aa13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 PRR30Q53SZ7 412 aaPredicted RBP13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 SLC9A4Q6AI14 798 aa13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 ALKBH5Q6P6C2 394 aaKnown RBP13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 FAM198BQ6UWH4 519 aa13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 SYTL1Q8IYJ3 562 aa13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 PLD5Q8N7P1 536 aa13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 RASGEF1AQ8N9B8 481 aa13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 CLEC1AQ8NC01 280 aa13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 COG1Q8WTW3 980 aa13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 SNRNP40Q96DI7 357 aaKnown RBP13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 TCTN2Q96GX1 697 aa13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 OLFM3Q96PB7 478 aa13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 BARD1Q99728 777 aaKnown RBP13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 ACTR5Q9H9F9 607 aaPredicted RBP13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 MAP10Q9P2G4 905 aa13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 SERTAD3Q9UJW9 196 aa13.92□□□□□ -0.18
LYSMD3-202ENST00000453259 POMT2Q9UKY4 750 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms