RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 IMP3Q9NV31 184 aaKnown RBP12.63□□□□□ -0.39
CHD3-206ENST00000452447 FEZ2Q9UHY8 353 aaPredicted RBP12.63□□□□□ -0.39
CHD3-206ENST00000452447 KCTD3Q9Y597 815 aa12.63□□□□□ -0.39
CHD3-206ENST00000452447 SEC16AO15027 2179 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 GOLGA6L6A8MZA4 724 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 FTCDO95954 541 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 SFTPCP11686 197 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 ITGALP20701 1170 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 SPARCL1Q14515 664 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 RPE65Q16518 533 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 TBR1Q16650 682 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 PARP6Q2NL67 630 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 METRNLQ641Q3 311 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 FAM83HQ6ZRV2 1179 aaPredicted RBP12.62□□□□□ -0.39
CHD3-206ENST00000452447 FAM92BQ6ZTR7 304 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 TMEM139Q8IV31 216 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 FAM71DQ8N9W8 422 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 OR13C4Q8NGS5 318 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 OR6C1Q96RD1 312 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 C19orf43Q9BQ61 176 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 SLC12A9Q9BXP2 914 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 ARNT2Q9HBZ2 717 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 SIDT1Q9NXL6 827 aaKnown RBP12.62□□□□□ -0.39
CHD3-206ENST00000452447 FAM8A1Q9UBU6 413 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 ACSL5Q9ULC5 683 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 TMEM184BQ9Y519 407 aaPredicted RBP12.62□□□□□ -0.39
CHD3-206ENST00000452447 SPTBP11277 2137 aa12.62□□□□□ -0.39
CHD3-206ENST00000452447 FLNBO75369 2602 aaKnown RBP12.62□□□□□ -0.39
CHD3-206ENST00000452447 ZNF891A8MT65 544 aaPredicted RBP12.61□□□□□ -0.39
CHD3-206ENST00000452447 CFAP99D6REC4 459 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 KIF1CO43896 1103 aaKnown RBP12.61□□□□□ -0.39
CHD3-206ENST00000452447 FAM87AP0C7U9 286 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 MTHFD1P11586 935 aaKnown RBP12.61□□□□□ -0.39
CHD3-206ENST00000452447 SH3BP2P78314 561 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 XIAPP98170 497 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 ABHD18Q0P651 414 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 IL11RAQ14626 422 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 GSE1Q14687 1217 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 P3H1Q32P28 736 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 CYB5D1Q6P9G0 228 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 TIPARPQ7Z3E1 657 aaKnown RBP12.61□□□□□ -0.39
CHD3-206ENST00000452447 PRSS42Q7Z5A4 293 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 SNX20Q7Z614 316 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 RASGRP3Q8IV61 690 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 ESX1Q8N693 406 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 EXD3Q8N9H8 876 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 GPR150Q8NGU9 434 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 OR2L2Q8NH16 312 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 NAT14Q8WUY8 206 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 HEXDCQ8WVB3 486 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 SLC45A3Q96JT2 553 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 COPS8Q99627 209 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 ULBP3Q9BZM4 244 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 SPRY4Q9C004 299 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 FAM117AQ9C073 453 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 RAB33BQ9H082 229 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 WWP1Q9H0M0 922 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 FAM96AQ9H5X1 160 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 EPHA6Q9UF33 1036 aa12.61□□□□□ -0.39
CHD3-206ENST00000452447 CFAP20Q9Y6A4 193 aaKnown RBP12.61□□□□□ -0.39
CHD3-206ENST00000452447 LOC101059948A0A1B0GTJ6 334 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 AGAP14A8MT82 685 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 SLC35G4P0C7Q5 338 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 CDC25BP30305 580 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 ZNF140P52738 457 aaPredicted RBP12.6□□□□□ -0.39
CHD3-206ENST00000452447 NFATC3Q12968 1075 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 KLF1Q13351 362 aaPredicted RBP12.6□□□□□ -0.39
CHD3-206ENST00000452447 MSLNQ13421 630 aaPredicted RBP12.6□□□□□ -0.39
CHD3-206ENST00000452447 KRT33BQ14525 404 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 BCL7AQ4VC05 210 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 DENND5AQ6IQ26 1287 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 BORAQ6PGQ7 559 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 CFAP206Q8IYR0 622 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 UNC5BQ8IZJ1 945 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 NXPE1Q8N323 547 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 RNF10Q8N5U6 811 aaKnown RBP12.6□□□□□ -0.39
CHD3-206ENST00000452447 LINC00615Q96LM1 132 aaPredicted RBP12.6□□□□□ -0.39
CHD3-206ENST00000452447 C12orf66Q96MD2 445 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 ALS2CR12Q96Q35 445 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 TMEM121Q9BTD3 319 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 LRRC40Q9H9A6 602 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 A0A0U1RQJ8 604 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 DDX3YO15523 660 aaKnown RBP12.6□□□□□ -0.39
CHD3-206ENST00000452447 PSMD3O43242 534 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 LDB2O43679 373 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 METTL18O95568 372 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 DLGAP3O95886 979 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 POLBP06746 335 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 ATP1B2P14415 290 aaPredicted RBP12.6□□□□□ -0.39
CHD3-206ENST00000452447 NELFEP18615 380 aaKnown RBP12.6□□□□□ -0.39
CHD3-206ENST00000452447 MC4RP32245 332 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 ARL4DP49703 201 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 POU6F1Q14863 301 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 GPR33Q49SQ1 333 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 ZRANB3Q5FWF4 1079 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 KCTD11Q693B1 232 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 PPP1R3BQ86XI6 285 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 KLHDC8BQ8IXV7 354 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 ZFPM2Q8WW38 1151 aa12.6□□□□□ -0.39
CHD3-206ENST00000452447 KLHL6Q8WZ60 621 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms