RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 CACNG1Q06432 222 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 GPR18Q14330 331 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 DBN1Q16643 649 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 KCTD19Q17RG1 926 aaPredicted RBP13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 C4orf22Q6V702 233 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 SPDYE1Q8NFV5 336 aaPredicted RBP13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 PMEPA1Q969W9 287 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 SGSM3Q96HU1 749 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 STN1Q9H668 368 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 EIF2B3Q9NR50 452 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 HOMER3Q9NSC5 361 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 EPHA6Q9UF33 1036 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 SLC2A6Q9UGQ3 507 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 CRLS1Q9UJA2 301 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 PSMD13Q9UNM6 376 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 MN1Q10571 1320 aaPredicted RBP13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 TLN1Q9Y490 2541 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 KLK10O43240 276 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 UBXN7O94888 489 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 APRTP07741 180 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 ANKRD34CP0C6C1 535 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 AKT1P31749 480 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 FOXN2P32314 431 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 MC2RQ01718 297 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 SEPT6Q14141 434 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 TGIF1Q15583 401 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 TSTD2Q5T7W7 516 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 TTC27Q6P3X3 843 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 ZNF534Q76KX8 674 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 CLDN19Q8N6F1 224 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 CCDC89Q8N998 374 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 DNAAF3Q8N9W5 541 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 ZFPM2Q8WW38 1151 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 HDAC10Q969S8 669 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 DCUN1D1Q96GG9 259 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 AHCYL2Q96HN2 611 aaKnown RBP13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 MS4A14Q96JA4 679 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 PBKQ96KB5 322 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 TAAR9Q96RI9 348 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 RAB33BQ9H082 229 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 ZNF106Q9H2Y7 1883 aaKnown RBP13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 SEMA5BQ9P283 1151 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 NEU2Q9Y3R4 380 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 PRSS21Q9Y6M0 314 aa13.77□□□□□ -0.21
RTFDC1-204ENST00000449062 ATMQ13315 3056 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 CCDC78A2IDD5 438 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 HEATR9A2RTY3 570 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 OR51F1A6NGY5 319 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 RALBP11234 206 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 MTHFD1P11586 935 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 TYRP1P17643 537 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 CSTF2P33240 577 aaKnown RBP eCLIP13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 MAGEA6P43360 314 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 MAPK10P53779 464 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 GFERP55789 205 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 CYP1B1Q16678 543 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 SOWAHCQ53LP3 525 aaPredicted RBP13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 ZRANB3Q5FWF4 1079 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 TAS2R42Q7RTR8 314 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 ZFAND4Q86XD8 727 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 JAMLQ86YT9 394 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 PLXDC1Q8IUK5 500 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 CFAP206Q8IYR0 622 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 GPR150Q8NGU9 434 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 COG1Q8WTW3 980 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 RSC1A1Q92681 617 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 PEX13Q92968 403 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 CXorf40BQ96DE9 158 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 C9orf72Q96LT7 481 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 BBC3Q96PG8 261 aaPredicted RBP13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 WWP1Q9H0M0 922 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 OR52A5Q9H2C5 316 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 FBXO8Q9NRD0 319 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 CHRAC1Q9NRG0 131 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 AKAP7Q9P0M2 348 aaPredicted RBP13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 SPTA1P02549 2419 aa13.76□□□□□ -0.21
RTFDC1-204ENST00000449062 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 TCRBV7S3A2A0A539 114 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 A8MU76 341 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 CFAP99D6REC4 459 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 E7EVH7 732 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 TOX3O15405 576 aaPredicted RBP13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 KIF1CO43896 1103 aaKnown RBP13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 AP2A2O94973 939 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 POLBP06746 335 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 MSNP26038 577 aaKnown RBP13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 PDHA2P29803 388 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 HALP42357 657 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 LEPRP48357 1165 aaKnown RBP13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 NPY2RP49146 381 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 CDK16Q00536 496 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 LAMB3Q13751 1172 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 ITIH4Q14624 930 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 PCID2Q5JVF3 399 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 SNAP47Q5SQN1 464 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 PACS1Q6VY07 963 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 PPP1R21Q6ZMI0 780 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 NLRP9Q7RTR0 991 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 TRIM48Q8IWZ4 208 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms