RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 ZFXP17010 805 aaPredicted RBP7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 XPAP23025 273 aaPredicted RBP7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 SSR1P43307 286 aaKnown RBP7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 RABIFP47224 123 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 NUMBP49757 651 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 YPEL5P62699 121 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 BCL2L1Q07817 233 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 PAFAH1B3Q15102 231 aaKnown RBP7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 SPA17Q15506 151 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 TRIP6Q15654 476 aaKnown RBP7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 SMTNL2Q2TAL5 461 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 POM121L1PQ3SYA9 428 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 TMEM52BQ4KMG9 183 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 KCNT1Q5JUK3 1230 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 CFAP58Q5T655 872 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 ERAP2Q6P179 960 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 BZW1Q7L1Q6 419 aaKnown RBP7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 SRLQ86TD4 932 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 TMTC1Q8IUR5 882 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 SCUBE1Q8IWY4 988 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 RAVER1Q8IY67 606 aaKnown RBP7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 TXLNBQ8N3L3 684 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 ATPAF2Q8N5M1 289 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 NPWQ8N729 165 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 TC2NQ8N9U0 490 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 DEFB124Q8NES8 71 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 ECHDC3Q96DC8 303 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 CELF6Q96J87 481 aaKnown RBP7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 TBATAQ96M53 351 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 CHP1Q99653 195 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 BRD8Q9H0E9 1235 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 KLHL11Q9NVR0 708 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 DDX56Q9NY93 547 aaKnown RBP7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 DNPEPQ9ULA0 475 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 PCDHGA1Q9Y5H4 931 aa7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 COL5A1P20908 1838 aaPredicted RBP7.78□□□□□ -1.16
SMARCE1-206ENST00000447024 PLXNA2O75051 1894 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 FAM221BA6H8Z2 402 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 NEMP2A6NFY4 417 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 TMEM110-MUSTN1A8MSY1 372 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 PLK4O00444 970 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 FPGTO14772 594 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 GSTA4O15217 222 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 SLC31A1O15431 190 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 HTRA2O43464 458 aaPredicted RBP7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 TM7SF2O76062 418 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 WNT1P04628 370 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 CA4P22748 312 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 IL4RP24394 825 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 CCNCP24863 283 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 EPHA8P29322 1005 aaPredicted RBP7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 MAT2AP31153 395 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 GARSP41250 739 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 PEX5P50542 639 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 ZNF75DP51815 510 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 HNRNPKP61978 463 aaKnown RBP eCLIP7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 SUMO1P63165 101 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 SIM1P81133 766 aaPredicted RBP7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 GALNT2Q10471 571 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 DPYSL3Q14195 570 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 PTK2BQ14289 1009 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 ZNF235Q14590 738 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 UGP2Q16851 508 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 ODF2Q5BJF6 829 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 ANKRD20A8PQ5CZ79 823 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 ATXN7L2Q5T6C5 722 aaPredicted RBP7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 MARC1Q5VT66 337 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 SPATC1Q76KD6 591 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 RHOT1Q8IXI2 618 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 NDUFAF2Q8N183 169 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 SDR16C5Q8N3Y7 309 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 TEX26Q8N6G2 289 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 OR6K2Q8NGY2 324 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 CXorf40AQ8TE69 158 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 SAP25Q8TEE9 199 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 ASB15Q8WXK1 588 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 MAML1Q92585 1016 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 VOPP1Q96AW1 172 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 ZNF830Q96NB3 372 aaPredicted RBP7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 RNF157Q96PX1 679 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 NUDCD1Q96RS6 583 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 MGME1Q9BQP7 344 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 PACSIN1Q9BY11 444 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 USP29Q9HBJ7 922 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 FSCN3Q9NQT6 498 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 NCKIPSDQ9NZQ3 722 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 ATP8A1Q9Y2Q0 1164 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 ACTL7AQ9Y615 435 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 SLCO1B1Q9Y6L6 691 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 CSNK1G3Q9Y6M4 447 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 CACNA1BQ00975 2339 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 ACACAQ13085 2346 aa7.77□□□□□ -1.17
SMARCE1-206ENST00000447024 TRBV23-1A0A0A0MS06 115 aa7.76□□□□□ -1.17
SMARCE1-206ENST00000447024 SPTY2D1-AS1A0A0U1RR47 76 aa7.76□□□□□ -1.17
SMARCE1-206ENST00000447024 TMEM8BA6NDV4 472 aa7.76□□□□□ -1.17
SMARCE1-206ENST00000447024 IGLON5A6NGN9 336 aa7.76□□□□□ -1.17
SMARCE1-206ENST00000447024 BTNL10A8MVZ5 291 aa7.76□□□□□ -1.17
SMARCE1-206ENST00000447024 GOLGA6L6A8MZA4 724 aa7.76□□□□□ -1.17
SMARCE1-206ENST00000447024 PSMD11O00231 422 aa7.76□□□□□ -1.17
SMARCE1-206ENST00000447024 TRAFD1O14545 582 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms