RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 SPRY4Q9C004 299 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 SPATC1LQ9H0A9 340 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 KCNN2Q9H2S1 579 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 SLCO5A1Q9H2Y9 848 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 ANKZF1Q9H8Y5 726 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 CNOT10Q9H9A5 744 aaKnown RBP4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 PIH1D3Q9NQM4 214 aaKnown RBP4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 COPG2Q9UBF2 871 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 ARMCX3Q9UH62 379 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 IL17BQ9UHF5 180 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 FBXW11Q9UKB1 542 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 CDH7Q9ULB5 785 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 NFS1Q9Y697 457 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 STON1Q9Y6Q2 735 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 MYO15BQ96JP2 1530 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 TAF1P21675 1872 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 A0A087WV48 116 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 C1orf226A1L170 272 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 KRT87PA6NCN2 255 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 TMEM202A6NGA9 273 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 CAPN9O14815 690 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 RTN2O75298 545 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 STAM2O75886 525 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 GBAP04062 536 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 PRLRP16471 622 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 CD58P19256 250 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 MAPK3P27361 379 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 HNRNPH1P31943 449 aaKnown RBP4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 GPR143P51810 404 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 HSD17B7P56937 341 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 MRPS34P82930 218 aaKnown RBP4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 SORDQ00796 357 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 DSC1Q08554 894 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 PPP6R3Q5H9R7 873 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 LCE1AQ5T7P2 110 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 GBP6Q6ZN66 633 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 SHFQ7M4L6 423 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 HAUS6Q7Z4H7 955 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 ADIPOR2Q86V24 386 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 GLCCI1Q86VQ1 547 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 NLRP14Q86W24 1093 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 ZDHHC17Q8IUH5 632 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 MFN1Q8IWA4 741 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 WDR63Q8IWG1 891 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 FBXL14Q8N1E6 418 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 ZBTB2Q8N680 514 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 SCCPDHQ8NBX0 429 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 AGBL3Q8NEM8 1001 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 OR8K5Q8NH50 307 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 IGSF8Q969P0 613 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 ZNF479Q96JC4 524 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 HARBI1Q96MB7 349 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 ZNF558Q96NG5 402 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 LRFN5Q96NI6 719 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 RUNDC3BQ96NL0 473 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 EGFL8Q99944 293 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 SLC25A33Q9BSK2 321 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 DNAJB4Q9UDY4 337 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 HACL1Q9UJ83 578 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 LEF1Q9UJU2 399 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 BLOC1S6Q9UL45 172 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 DOCK7Q96N67 2140 aa4.39□□□□□ -1.71
HMGB1P48-201ENST00000446155 IGLV5-52A0A0A0MRZ9 124 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 A0A0U1RQJ8 604 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 IFIT3O14879 490 aaKnown RBP4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 ATP2A1O14983 1001 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 CLIC2O15247 247 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 RSL1D1O76021 490 aaKnown RBP4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 ZWINTO95229 277 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 CYC1P08574 325 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 HMOX1P09601 288 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 ZNF12P17014 697 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 GJA1P17302 382 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 MAOAP21397 527 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 DNASE1P24855 282 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 ITGB8P26012 769 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 TNFRSF8P28908 595 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 CASP3P42574 277 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 PCYT1AP49585 367 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 NT5C2P49902 561 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 SLC12A3P55017 1021 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 CDH13P55290 713 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 ITGADQ13349 1161 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 RRS1Q15050 365 aaKnown RBP4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 SFMBT2Q5VUG0 894 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 LDB1Q86U70 411 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 LCA5Q86VQ0 697 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 CEP57Q86XR8 500 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 KLHL7Q8IXQ5 586 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 PEX5LQ8IYB4 626 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 IQCF1Q8N6M8 205 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 NHLRC2Q8NBF2 726 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 OR14A16Q8NHC5 309 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 FAM216AQ8WUB2 273 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 LYZL4Q96KX0 146 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 MARK4Q96L34 752 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 TSGA13Q96PP4 275 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 NUDCD1Q96RS6 583 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 HAUS8Q9BT25 410 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 SPXQ9BT56 116 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms