RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 GNPTGQ9UJJ9 305 aa16.57■□□□□ 0.24
LAPTM4B-201ENST00000445593 SLC25A13Q9UJS0 675 aa16.57■□□□□ 0.24
LAPTM4B-201ENST00000445593 TTC34A8MYJ7 566 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 H7C0S8 307 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 SLC22A2O15244 555 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 HTRA2O43464 458 aaPredicted RBP16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 ARHGEF15O94989 841 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 HSPA1AP0DMV8 641 aaKnown RBP16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 HSPA1BP0DMV9 641 aaKnown RBP16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 PABPC1P11940 636 aaKnown RBP16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 AMIGO2Q86SJ2 522 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 EMILIN2Q9BXX0 1053 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 DTNAQ9Y4J8 743 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 PLXNA4Q9HCM2 1894 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 CLCN4P51793 760 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 PTSQ03393 145 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 NRF1Q16656 503 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 LRRC23Q53EV4 343 aaPredicted RBP16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 RABL3Q5HYI8 236 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 SERPINA13PQ6UXR4 307 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 PPWD1Q96BP3 646 aaKnown RBP16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 SPATA16Q9BXB7 569 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 BRD9Q9H8M2 597 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 ZFP14Q9HCL3 533 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 IL23AQ9NPF7 189 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 BLOC1S6Q9UL45 172 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 AURKCQ9UQB9 309 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 NDUFAF1Q9Y375 327 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 NOTCH4Q99466 2003 aa16.56■□□□□ 0.24
LAPTM4B-201ENST00000445593 GRXCR1A8MXD5 290 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 RNASEH1O60930 286 aaKnown RBP16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 FGF4P08620 206 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 HMGCS1Q01581 520 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 GTF2H2Q13888 395 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 TMEM215Q68D42 235 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 GTF2H2CQ6P1K8 395 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 CACUL1Q86Y37 369 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 NXPE1Q8N323 547 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 ZBTB2Q8N680 514 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 TMEM74Q96NL1 305 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 MAP10Q9P2G4 905 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 APPL1Q9UKG1 709 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 USP22Q9UPT9 525 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 PRUNE2Q8WUY3 3088 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 RNASEH2AO75792 299 aaKnown RBP16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 HMOX2P30519 316 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 GRIA3P42263 894 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 RGS4P49798 205 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 TCEAL5Q5H9L2 206 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 USP45Q70EL2 814 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 FAM217AQ8IXS0 508 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 ASB2Q96Q27 587 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 PRKAG2Q9UGJ0 569 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 PSMD13Q9UNM6 376 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 INSL6Q9Y581 213 aa16.55■□□□□ 0.24
LAPTM4B-201ENST00000445593 OR2AG2A6NM03 316 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 MAP3K13O43283 966 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 RECQLP46063 649 aaPredicted RBP16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 C1orf53Q5VUE5 145 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 ICA1LQ8NDH6 482 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 CLHC1Q8NHS4 586 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 TUBGCP5Q96RT8 1024 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 RHBDL2Q9NX52 303 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 KLQ9UEF7 1012 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 SNX13Q9Y5W8 968 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 ACOT8O14734 319 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 MLYCDO95822 493 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 UROSP10746 265 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 MESP2Q0VG99 397 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 NFYCQ13952 458 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 TRIM25Q14258 630 aaKnown RBP16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 ABRAXAS2Q15018 415 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 CDKN3Q16667 212 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 CERS6Q6ZMG9 384 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 MILR1Q7Z6M3 343 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 ADAMTSL2Q86TH1 951 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 PDSS2Q86YH6 399 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 CPXM2Q8N436 756 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 MRPL43Q8N983 215 aaKnown RBP16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 LRTOMTQ8WZ04 291 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 FOXJ1Q92949 421 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 IRF7Q92985 503 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 POLR3HQ9Y535 204 aaPredicted RBP16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 PCDHB1Q9Y5F3 818 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 NME4O00746 187 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 RAD51BO15315 384 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 MOSPD3O75425 235 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 BCAS2O75934 225 aaPredicted RBP16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 PENKP01210 267 aaPredicted RBP16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 MT-ND1P03886 318 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 NCK1P16333 377 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 ARSIQ5FYB1 569 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 PAGE3Q5JUK9 113 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 Q6ZVL8 140 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 COPS8Q99627 209 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 FAM126AQ9BYI3 521 aaPredicted RBP16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 EPS15L1Q9UBC2 864 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 ITM2BQ9Y287 266 aa16.54■□□□□ 0.24
LAPTM4B-201ENST00000445593 OBSL1O75147 1896 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 ANTXRLA6NF34 631 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms