RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 APOBEC4Q8WW27 367 aaKnown RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 MAIP1Q8WWC4 291 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 SLCO2A1Q92959 643 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 NAT6Q93015 286 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 AZIN2Q96A70 460 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 TMEM159Q96B96 161 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 CELF6Q96J87 481 aaKnown RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 DHRS1Q96LJ7 313 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 PWWP2AQ96N64 755 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 QKIQ96PU8 341 aaKnown RBP eCLIP4.78□□□□□ -1.645e-8■■■■■ 69
PTPN4-206ENST00000441089 NAP1L3Q99457 506 aaPredicted RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 RHOXF2Q9BQY4 288 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 TMEM121Q9BTD3 319 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 MAK16Q9BXY0 300 aaKnown RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 UNKQ9C0B0 810 aaKnown RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 B3GNT4Q9C0J1 378 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 SLC39A8Q9C0K1 460 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 PABPC3Q9H361 631 aaKnown RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 EBF2Q9HAK2 575 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 EPB41L5Q9HCM4 733 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 TMEM51Q9NW97 253 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 TMEM248Q9NWD8 314 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 SUCOQ9UBS9 1254 aaKnown RBP4.78□□□□□ -1.64
PTPN4-206ENST00000441089 SUN2Q9UH99 717 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 PCYOX1Q9UHG3 505 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 SLC12A6Q9UHW9 1150 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 FZD4Q9ULV1 537 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 CLEC4EQ9ULY5 219 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 PLA2G2DQ9UNK4 145 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 AKAP6Q13023 2319 aa4.78□□□□□ -1.64
PTPN4-206ENST00000441089 TNRC6AQ8NDV7 1962 aaKnown RBP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 UQCRHLA0A096LP55 91 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 LY6G6EA0A0G2JKS1 128 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 ESYT3A0FGR9 886 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 EME2A4GXA9 379 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 F5H5T6 163 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 MKRN2OSH3BPM6 223 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 STMND1H3BQB6 276 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 H7C0C1 242 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 K7ESM1 405 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 WNT9AO14904 365 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 TP73O15350 636 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 FGF10O15520 208 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 DAPK3O43293 454 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 LATO43561 262 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 TBL1XO60907 577 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 HEXIM1O94992 359 aaKnown RBP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 ZNF205O95201 554 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 PEX11BO96011 259 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 PENKP01210 267 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 UQCRHP07919 91 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 GIMD1P0DJR0 217 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 MYBL2P10244 700 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 RBP3P10745 1247 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 ZFXP17010 805 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 VAMP1P23763 118 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 IVDP26440 423 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 RBL1P28749 1068 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 ECHS1P30084 290 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 HTR7P34969 479 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 RPL22P35268 128 aaKnown RBP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 CHKAP35790 457 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 ACVRL1P37023 503 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 ATP5OP48047 213 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 LEPRP48357 1165 aaKnown RBP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 SLC11A2P49281 568 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 NUMBP49757 651 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 HNRNPKP61978 463 aaKnown RBP eCLIP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 VSNL1P62760 191 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 DR1Q01658 176 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 ZBTB17Q13105 803 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 XRCC4Q13426 336 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 PTK6Q13882 451 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 FGL2Q14314 439 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 PRKD1Q15139 912 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 TESK1Q15569 626 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 TRIP13Q15645 432 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 SLC14A2Q15849 920 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 CDKN3Q16667 212 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 EIF2S3LQ2VIR3 472 aaKnown RBP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 FSCBQ5H9T9 825 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 DUPD1Q68J44 220 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 CXorf57Q6NSI4 855 aaKnown RBP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 TCTN3Q6NUS6 607 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 C8orf74Q6P047 294 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 TMCO3Q6UWJ1 677 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 ZDHHC24Q6UX98 284 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 TFAP2DQ7Z6R9 452 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 ZFAND4Q86XD8 727 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 GSPT2Q8IYD1 628 aaKnown RBP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 UMODL1-AS1Q8N2C9 162 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 CPXM2Q8N436 756 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 ATL2Q8NHH9 583 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 CASKIN2Q8WXE0 1202 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 SEC14L1Q92503 715 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 UBXN4Q92575 508 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 P3H4Q92791 437 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 HDAC11Q96DB2 347 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 RTP4Q96DX8 246 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms