RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 IL12AP29459 219 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 ERVK-8P63133 956 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 HMGCS1Q01581 520 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 PTGR1Q14914 329 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 INAVAQ3KP66 663 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 RAP1GAP2Q684P5 730 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 RANBP10Q6VN20 620 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 PAQR9Q6ZVX9 377 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 TOP6BLQ8N6T0 577 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 OR4K2Q8NGD2 314 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 OR52B6Q8NGF0 335 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 FAR1Q8WVX9 515 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 TMEM209Q96SK2 561 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 MUC13Q9H3R2 512 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 FAM234BA2RU67 622 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 CXCR6O00574 342 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 NIPSNAP2O75323 286 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 OR4Q2P0C623 313 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 UROSP10746 265 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 DARSP14868 501 aaKnown RBP8.94□□□□□ -0.98
COPB1-202ENST00000439561 HRH2P25021 359 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 RPS12P25398 132 aaKnown RBP8.94□□□□□ -0.98
COPB1-202ENST00000439561 OR1E1P30953 314 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 HCAR3P49019 387 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 ADARB1P78563 741 aaKnown RBP8.94□□□□□ -0.98
COPB1-202ENST00000439561 OXA1LQ15070 435 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 C6orf136Q5SQH8 315 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 PRAMEF19Q5SWL8 479 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 CYP20A1Q6UW02 462 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 GLT6D1Q7Z4J2 308 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 GALNT10Q86SR1 603 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 CNTN4Q8IWV2 1026 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 SETD9Q8NE22 299 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 LPCAT1Q8NF37 534 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 UTP15Q8TED0 518 aaKnown RBP8.94□□□□□ -0.98
COPB1-202ENST00000439561 OR52E6Q96RD3 313 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 MAF1Q9H063 256 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 TREX1Q9NSU2 369 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.94□□□□□ -0.98
COPB1-202ENST00000439561 WWOXQ9NZC7 414 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 ABCD2Q9UBJ2 740 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 ENPP5Q9UJA9 477 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 VPS4AQ9UN37 437 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 IQCF5A8MTL0 148 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 SLC22A1O15245 554 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 FGF10O15520 208 aaPredicted RBP8.93□□□□□ -0.98
COPB1-202ENST00000439561 RGS10O43665 173 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 TLR5O60602 858 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 RAMP2O60895 175 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 SH3BGRLO75368 114 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 MLYCDO95822 493 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 CHRNA1P02708 482 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 ALPLP05186 524 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 C7P10643 843 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 HTR6P50406 440 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 IL2P60568 153 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 TWF1Q12792 350 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 RAPSNQ13702 412 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 SMN1Q16637 294 aaKnown RBP8.93□□□□□ -0.98
COPB1-202ENST00000439561 ATAD3BQ5T9A4 648 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 PTRHD1Q6GMV3 140 aaKnown RBP8.93□□□□□ -0.98
COPB1-202ENST00000439561 TRAF7Q6Q0C0 670 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 SLC35B4Q969S0 331 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 CAMKK2Q96RR4 588 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 APOL4Q9BPW4 351 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 ZBED2Q9BTP6 218 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 MROQ9BYG7 248 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 DCSTAMPQ9H295 470 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 AIG1Q9NVV5 245 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 GPR45Q9Y5Y3 372 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 GPR182O15218 404 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 AIREO43918 545 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 MT-ND2P03891 347 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 ENO2P09104 434 aaPredicted RBP8.93□□□□□ -0.98
COPB1-202ENST00000439561 HAPLN1P10915 354 aaPredicted RBP8.93□□□□□ -0.98
COPB1-202ENST00000439561 EFNA1P20827 205 aaPredicted RBP8.93□□□□□ -0.98
COPB1-202ENST00000439561 WARSP23381 471 aaKnown RBP8.93□□□□□ -0.98
COPB1-202ENST00000439561 AZGP1P25311 298 aaKnown RBP8.93□□□□□ -0.98
COPB1-202ENST00000439561 DNAJB1P25685 340 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 HTR1EP28566 365 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 AQP1P29972 269 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 EMX1Q04741 257 aaPredicted RBP8.93□□□□□ -0.98
COPB1-202ENST00000439561 FOXM1Q08050 763 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 CBLBQ13191 982 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 GTDC1Q4AE62 458 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 CACHD1Q5VU97 1274 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 KIAA0319Q5VV43 1072 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 ARMCX6Q7L4S7 300 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 SIX5Q8N196 739 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 SVOPQ8N4V2 548 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 OR13J1Q8NGT2 312 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 KCTD13Q8WZ19 329 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 KCNN1Q92952 543 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 DUS3LQ96G46 650 aaKnown RBP8.93□□□□□ -0.98
COPB1-202ENST00000439561 UBXN10Q96LJ8 280 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 DEPDC7Q96QD5 511 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 CHCHD6Q9BRQ6 235 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 MROH8Q9H579 483 aa8.93□□□□□ -0.98
COPB1-202ENST00000439561 FAM124BQ9H5Z6 455 aaPredicted RBP8.93□□□□□ -0.98
COPB1-202ENST00000439561 GPN2Q9H9Y4 310 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms