RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 DCTN2Q13561 401 aaKnown RBP13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 CTSL3PQ5NE16 218 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 RBM12BQ8IXT5 1001 aaKnown RBP13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 MYO1HQ8N1T3 1032 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 EEF1AKMT1Q8WVE0 214 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 DLG3Q92796 817 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 LMLNQ96KR4 655 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 RPL10LQ96L21 214 aaKnown RBP13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 SAMD11Q96NU1 681 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 BBS2Q9BXC9 721 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 MRGBPQ9NV56 204 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 SUCOQ9UBS9 1254 aaKnown RBP13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 CROTQ9UKG9 612 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 PRSS51A0A1B0GVH4 220 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 TRIM24O15164 1050 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 FGF4P08620 206 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 CTPS1P17812 591 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 STK19P49842 368 aaPredicted RBP13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 NR1H2P55055 460 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 AP1S1P61966 158 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 FUT11Q495W5 492 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 ASTLQ6HA08 431 aaPredicted RBP13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 UGT3A1Q6NUS8 523 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 SCIMPQ6UWF3 145 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 CAMK1DQ8IU85 385 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 ITFG1Q8TB96 612 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 LINGO1Q96FE5 620 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 ASB2Q96Q27 587 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 SLC2A11Q9BYW1 496 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 TNKS2Q9H2K2 1166 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 CAAP1Q9H8G2 361 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 COQ10BQ9H8M1 238 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 DPP7Q9UHL4 492 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 EVLQ9UI08 416 aaPredicted RBP13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 TRMT6Q9UJA5 497 aaKnown RBP13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 MRPS23Q9Y3D9 190 aaKnown RBP13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 ASB1Q9Y576 335 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 GMEB1Q9Y692 573 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 WNT6Q9Y6F9 365 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 OAS3Q9Y6K5 1087 aaKnown RBP13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 E5RI56 91 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 VPS26AO75436 327 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 ALPIP09923 528 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 TFPTP0C1Z6 253 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 PKMP14618 531 aaKnown RBP13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 GKP32189 559 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 PLOD1Q02809 727 aaPredicted RBP13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 PHYKPLQ8IUZ5 450 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 TRIML2Q8N7C3 387 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 ADCY4Q8NFM4 1077 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 FAM110BQ8TC76 370 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 SMG7Q92540 1137 aaKnown RBP13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 IRF7Q92985 503 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 CCDC97Q96F63 343 aaPredicted RBP13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 TCF12Q99081 682 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 SLC29A1Q99808 456 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 CCT7Q99832 543 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 TRIM8Q9BZR9 551 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 SOBPA7XYQ1 873 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 BOLA2-SMG1P6H3BVE0 249 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 ZNF197O14709 1029 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 TSPAN12O95859 305 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 PSMC3P17980 439 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 CAPN3P20807 821 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 TTPAP49638 278 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 DIO3P55073 304 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 ATP6V0D1P61421 351 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 ANKDD1AQ495B1 522 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 COL13A1Q5TAT6 717 aaPredicted RBP13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 ANKS6Q68DC2 871 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 TMC5Q6UXY8 1006 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 TSPAN14Q8NG11 270 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 CD200R1Q8TD46 325 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 LRTOMTQ8WZ04 291 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 EME1Q96AY2 570 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 MYO19Q96H55 970 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 SPHK2Q9NRA0 654 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 SARDHQ9UL12 918 aa13.69□□□□□ -0.22
PTCHD3-201ENST00000438700 ARHGAP10A1A4S6 786 aa13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 SYCE1LA8MT33 242 aa13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 FZD6O60353 706 aa13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 ZNF821O75541 412 aaPredicted RBP13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 TYRP14679 529 aa13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 ARL1P40616 181 aaPredicted RBP13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 NRIP1P48552 1158 aa13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 ACADVLP49748 655 aa13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 ENTPD1P49961 510 aa13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 HK3P52790 923 aa13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 YBX1P67809 324 aaKnown RBP13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 CAPRIN1Q14444 709 aaKnown RBP13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 RPS6KA2Q15349 733 aa13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 RBBP7Q16576 425 aa13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 DGKKQ5KSL6 1271 aa13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 C6orf10Q5SRN2 563 aa13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 LY6G5CQ5SRR4 150 aa13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 LYSMD3Q7Z3D4 306 aa13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 MIER2Q8N344 545 aa13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 EID2BQ96D98 161 aa13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 TIMMDC1Q9NPL8 285 aa13.68□□□□□ -0.22
PTCHD3-201ENST00000438700 RSL24D1Q9UHA3 163 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms