RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 NPIPB15A6NHN6 443 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 H0YIN7 160 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 TMEM178BH3BS89 294 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 IFNL4K9M1U5 179 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 BUD23O43709 281 aaKnown RBP2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 USO1O60763 962 aaKnown RBP2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 CLPTM1O96005 669 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 LAMP2P13473 410 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 CDH2P19022 906 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 UBA7P41226 1012 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 CTCFP49711 727 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 RARSP54136 660 aaKnown RBP2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 NAP1L1P55209 391 aaKnown RBP2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 KCNJ10P78508 379 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 GSTA3Q16772 222 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 USP41Q3LFD5 358 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 SLC9B1Q4ZJI4 515 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 KRTCAP3Q53RY4 240 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 C6orf141Q5SZD1 244 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 ADAMTSL4-AS1Q5T5F5 129 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 MZT2BQ6NZ67 158 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 ZNF613Q6PF04 617 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 GRHL3Q8TE85 626 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 FAM149B1Q96BN6 582 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 OXNAD1Q96HP4 312 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 GMPPAQ96IJ6 420 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 ZNF414Q96IQ9 312 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 ZNF300Q96RE9 604 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 PCGF1Q9BSM1 259 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 STRA6Q9BX79 667 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 TRPC7Q9HCX4 862 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 SIX2Q9NPC8 291 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 DIAPH3Q9NSV4 1193 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 TBC1D22BQ9NU19 505 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 CAMK2AQ9UQM7 478 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 AAR2Q9Y312 384 aaKnown RBP2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 LAS1LQ9Y4W2 734 aaKnown RBP2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 STRCP1A6NGW2 1772 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 UTYO14607 1347 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 AGRNO00468 2067 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 HECW1Q76N89 1606 aa2.86□□□□□ -1.95
HMGB1P31-201ENST00000437242 ZNF318Q5VUA4 2279 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 ARHGEF12Q9NZN5 1544 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 PI4KAP2A4QPH2 592 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 LRRC53A6NM62 1247 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 ANKRD66B4E2M5 251 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 ANKRD28O15084 1053 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 LDLRAD4O15165 306 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 ZBED4O75132 1171 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 TPOP07202 933 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 ACADSP16219 412 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 HARS2P49590 506 aaKnown RBP2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 GNAQP50148 359 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 CLNS1AP54105 237 aaKnown RBP2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 SNRPD1P62314 119 aaKnown RBP2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 LMOD3Q0VAK6 560 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 EIF4A2Q14240 407 aaKnown RBP2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 KRT32Q14532 448 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 TBCEQ15813 527 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 CCNG2Q16589 344 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 TCTEX1D4Q5JR98 221 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 CCDC30Q5VVM6 783 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 PWWP2BQ6NUJ5 590 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 CDC73Q6P1J9 531 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 BHLHB9Q6PI77 547 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 TRIM65Q6PJ69 517 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 PACS1Q6VY07 963 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 DPPA4Q7L190 304 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 CPLX4Q7Z7G2 160 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 NGEFQ8N5V2 710 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 ZNF614Q8N883 585 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 PRMT6Q96LA8 375 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 TIGD1Q96MW7 591 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 AGAP3Q96P47 875 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 MAP7D2Q96T17 732 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 LBHD1Q9BQE6 289 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 TMEM47Q9BQJ4 181 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 USP44Q9H0E7 712 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 MUC13Q9H3R2 512 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 KRT84Q9NSB2 600 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 BLOC1S4Q9NUP1 217 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 TMEM181Q9P2C4 612 aa2.85□□□□□ -1.95
HMGB1P31-201ENST00000437242 ATP10BO94823 1461 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 ZFYVE16Q7Z3T8 1539 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 ABCA6Q8N139 1617 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 A0A0G2JNG1 304 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 A0A1W2PRG0 241 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 MAGEB17A8MXT2 336 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 USP17L23D6RBM5 183 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 FAM90A26D6RGX4 464 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 SLCO1B7G3V0H7 640 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 KCNN4O15554 427 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 EML2O95834 649 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 HMBSP08397 361 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 FAM157CP0CG43 387 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 ACADMP11310 421 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 GATA2P23769 480 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 ITGA3P26006 1051 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 HOXC9P31274 260 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms