RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 TIE1P35590 1138 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 P2RY2P41231 377 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 FOXA1P55317 472 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 CLCQ05315 142 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 HSPA14Q0VDF9 509 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 CNTN1Q12860 1018 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 PHKG1Q16816 387 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 NXNQ6DKJ4 435 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 MTSS1LQ765P7 747 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 ADAMTSL2Q86TH1 951 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 DTD2Q96FN9 168 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 KCNA7Q96RP8 456 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 PRO3102Q9H379 93 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 LATS2Q9NRM7 1088 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 NFKBIL1Q9UBC1 381 aaPredicted RBP20.78■□□□□ 0.92
PTPRF-207ENST00000436724 CDYLQ9Y232 598 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 TRIOO75962 3097 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 K7EQS6 105 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 RECQL5O94762 991 aaPredicted RBP20.78■□□□□ 0.92
PTPRF-207ENST00000436724 RPS17P08708 135 aaKnown RBP20.78■□□□□ 0.92
PTPRF-207ENST00000436724 C6P13671 934 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 ANKS6Q68DC2 871 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 DDHD1Q8NEL9 900 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 FBXO27Q8NI29 283 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 BTN2A2Q8WVV5 523 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 P2RY13Q9BPV8 354 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 KCTD5Q9NXV2 234 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 TAS2R1Q9NYW7 299 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 FAM8A1Q9UBU6 413 aa20.78■□□□□ 0.92
PTPRF-207ENST00000436724 EIF2B4Q9UI10 523 aaKnown RBP20.78■□□□□ 0.92
PTPRF-207ENST00000436724 H0Y858 1186 aa20.77■□□□□ 0.92
PTPRF-207ENST00000436724 STX16-NPEPL1H3BU86 382 aa20.77■□□□□ 0.92
PTPRF-207ENST00000436724 SDHDO14521 159 aa20.77■□□□□ 0.92
PTPRF-207ENST00000436724 STX16O14662 325 aa20.77■□□□□ 0.92
PTPRF-207ENST00000436724 MAGEC1O60732 1142 aa20.77■□□□□ 0.92
PTPRF-207ENST00000436724 CD1EP15812 388 aa20.77■□□□□ 0.92
PTPRF-207ENST00000436724 MSH3P20585 1137 aa20.77■□□□□ 0.92
PTPRF-207ENST00000436724 PRDX3P30048 256 aaKnown RBP20.77■□□□□ 0.92
PTPRF-207ENST00000436724 ELP6Q0PNE2 266 aa20.77■□□□□ 0.92
PTPRF-207ENST00000436724 BOP1Q14137 746 aaKnown RBP20.77■□□□□ 0.92
PTPRF-207ENST00000436724 DSG4Q86SJ6 1040 aa20.77■□□□□ 0.92
PTPRF-207ENST00000436724 VRK3Q8IV63 474 aa20.77■□□□□ 0.92
PTPRF-207ENST00000436724 GLYATL1Q969I3 302 aa20.77■□□□□ 0.92
PTPRF-207ENST00000436724 MARK4Q96L34 752 aa20.77■□□□□ 0.92
PTPRF-207ENST00000436724 RAD18Q9NS91 495 aa20.77■□□□□ 0.92
PTPRF-207ENST00000436724 EPS15L1Q9UBC2 864 aa20.77■□□□□ 0.92
PTPRF-207ENST00000436724 PCTPQ9UKL6 214 aa20.77■□□□□ 0.92
PTPRF-207ENST00000436724 RGSL1A5PLK6 1076 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 C1QTNF3-AMACRE9PGA6 284 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 PSMD11O00231 422 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 FFAR2O15552 330 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 SOD1P00441 154 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 AOAHP28039 575 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 TTLL9Q3SXZ7 439 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 ACAD11Q709F0 780 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 POU5F2Q8N7G0 328 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 CSGALNACT1Q8TDX6 532 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 FAM161BQ96MY7 647 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 FAM126AQ9BYI3 521 aaPredicted RBP20.76■□□□□ 0.91
PTPRF-207ENST00000436724 ANHXE9PGG2 379 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 GYG2O15488 501 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 AOC1P19801 751 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 DRD3P35462 400 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 KIR2DL1P43626 348 aaPredicted RBP20.76■□□□□ 0.91
PTPRF-207ENST00000436724 NUDT18Q6ZVK8 323 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 TRIM74Q86UV6 250 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 DTX3LQ8TDB6 740 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 NUDT4Q9NZJ9 180 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 SORCS3Q9UPU3 1222 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 PTGDR2Q9Y5Y4 395 aa20.76■□□□□ 0.91
PTPRF-207ENST00000436724 TMEM202A6NGA9 273 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 TRPC5OSA6NMA1 111 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 CFAP99D6REC4 459 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 E2F3O00716 465 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 MID1O15344 667 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 CTSCP53634 463 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 CLNS1AP54105 237 aaKnown RBP20.75■□□□□ 0.91
PTPRF-207ENST00000436724 LCP2Q13094 533 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 ENPP2Q13822 863 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 UGT3A2Q3SY77 523 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 C2orf27AQ580R0 203 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 MBOAT1Q6ZNC8 495 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 NRSN1Q8IZ57 195 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 AADATQ8N5Z0 425 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 DCBLD1Q8N8Z6 715 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 RASGEF1AQ8N9B8 481 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 MAELQ96JY0 434 aaKnown RBP20.75■□□□□ 0.91
PTPRF-207ENST00000436724 TAGLN3Q9UI15 199 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 DNAJC15Q9Y5T4 150 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 ATP6AP2A0A1C7CYW4 349 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 LZTS3O60299 673 aaPredicted RBP20.75■□□□□ 0.91
PTPRF-207ENST00000436724 ATP6AP2O75787 350 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 SATB1Q01826 763 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 CREB5Q02930 508 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 COL19A1Q14993 1142 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 PIP5KL1Q5T9C9 394 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 METTL21CQ5VZV1 264 aa20.75■□□□□ 0.91
PTPRF-207ENST00000436724 ZNF483Q8TF39 744 aaPredicted RBP20.75■□□□□ 0.91
PTPRF-207ENST00000436724 SKA2Q8WVK7 121 aaPredicted RBP20.75■□□□□ 0.91
PTPRF-207ENST00000436724 NUS1Q96E22 293 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms