RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 KLHL20Q9Y2M5 609 aa3.06□□□□□ -1.92
HMGB1P27-201ENST00000431429 ABCC10Q5T3U5 1492 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 CTAGE9A4FU28 777 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 ANKUB1A6NFN9 424 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 PROB1E7EW31 1015 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 PLK4O00444 970 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 SSX4O60224 188 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 LDB3O75112 727 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 SERPINI2O75830 405 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 GCNT3O95395 438 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 CLDN14O95500 239 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 CTAGE8P0CG41 777 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 MUTP22033 750 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 PRKCZQ05513 592 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 MPP7Q5T2T1 576 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 PLA2G4FQ68DD2 849 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 PRR27Q6MZM9 219 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 RGMBQ6NW40 437 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 GFRALQ6UXV0 394 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 CCNI2Q6ZMN8 369 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 GPR180Q86V85 440 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 METTL23Q86XA0 190 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 CTAGE4Q8IX94 777 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 CEP57L1Q8IYX8 460 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 CAMKVQ8NCB2 501 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 EXD1Q8NHP7 514 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 GOT1L1Q8NHS2 421 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 UTP15Q8TED0 518 aaKnown RBP3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 DEPDC1BQ8WUY9 529 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 ASB5Q8WWX0 329 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 ATL1Q8WXF7 558 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 DNAAF4Q8WXU2 420 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 TANKQ92844 425 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 MR1Q95460 341 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 PIGTQ969N2 578 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 SPATA17Q96L03 361 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 QRFPRQ96P65 431 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 CSF3RQ99062 836 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 MTERF1Q99551 399 aaKnown RBP3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 SEMA3CQ99985 751 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 C2orf40Q9H1Z8 148 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 GAREM1Q9H706 876 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 KLHL1Q9NR64 748 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 MRGBPQ9NV56 204 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 SMARCAL1Q9NZC9 954 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 ANAPC5Q9UJX4 755 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 GTF3C4Q9UKN8 822 aa3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 TRIP12Q14669 1992 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P27-201ENST00000431429 MAGI1Q96QZ7 1491 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 PDS5AQ29RF7 1337 aaKnown RBP3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 IGLV5-37A0A075B6J1 123 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZCWPW2A0A1B0GU75 182 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 LINC01553A4QN01 128 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 OR5K3A6NET4 321 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 ANXA2P2A6NMY6 339 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 CLIC2O15247 247 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 SYNCRIPO60506 623 aaKnown RBP3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 KCNJ13O60928 360 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 KDM4BO94953 1096 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 RAB40ALP0C0E4 278 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 VDRP11473 427 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 HLA-DOBP13765 273 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 MYOD1P15172 320 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 GJA1P17302 382 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 GM2AP17900 193 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 ERCC2P18074 760 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 CYP11B2P19099 503 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 DNASE1P24855 282 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 TKTP29401 623 aaKnown RBP3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 HOXC13P31276 330 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 TLX1P31314 330 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 SNRPEP62304 92 aaKnown RBP3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 RBPJQ06330 500 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 ACSM1Q08AH1 577 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 TRAF2Q12933 501 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 TUBB2AQ13885 445 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 KRT33BQ14525 404 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZNF234Q14588 700 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 XKR9Q5GH70 373 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 C6orf136Q5SQH8 315 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 LRCH2Q5VUJ6 765 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 ALS2CLQ60I27 953 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 TRNP1Q6NT89 227 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 DPY19L2P1Q6NXN4 242 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 C11orf88Q6PI97 169 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZNF517Q6ZMY9 492 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZNF704Q6ZNC4 412 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 C9orf47Q6ZRZ4 202 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 MEPCEQ7L2J0 689 aaKnown RBP3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 DGLUCYQ7Z3D6 616 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 DNAJB7Q7Z6W7 309 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 SATL1Q86VE3 508 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 TMEM219Q86XT9 240 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 C1orf52Q8N6N3 182 aaKnown RBP3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 OR2AJ1Q8NGZ0 328 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 OR52I2Q8NH67 350 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 B4GALNT2Q8NHY0 566 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 OCC1Q8TAD7 63 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 SMPDL3BQ92485 455 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 MRPS27Q92552 414 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms