RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 C12orf66Q96MD2 445 aa20.25■□□□□ 0.83
HSPG2-205ENST00000427897 TTC1Q99614 292 aa20.25■□□□□ 0.83
HSPG2-205ENST00000427897 WWP1Q9H0M0 922 aa20.25■□□□□ 0.83
HSPG2-205ENST00000427897 KCNF1Q9H3M0 494 aa20.25■□□□□ 0.83
HSPG2-205ENST00000427897 PDP2Q9P2J9 529 aa20.25■□□□□ 0.83
HSPG2-205ENST00000427897 PKD1L2Q7Z442 2459 aa20.25■□□□□ 0.83
HSPG2-205ENST00000427897 HEATR9A2RTY3 570 aa20.24■□□□□ 0.83
HSPG2-205ENST00000427897 CAPN5O15484 640 aaPredicted RBP20.24■□□□□ 0.83
HSPG2-205ENST00000427897 APRTP07741 180 aa20.24■□□□□ 0.83
HSPG2-205ENST00000427897 ETS1P14921 441 aa20.24■□□□□ 0.83
HSPG2-205ENST00000427897 ATP1A2P50993 1020 aa20.24■□□□□ 0.83
HSPG2-205ENST00000427897 BCL7AQ4VC05 210 aa20.24■□□□□ 0.83
HSPG2-205ENST00000427897 CCDC38Q502W7 563 aa20.24■□□□□ 0.83
HSPG2-205ENST00000427897 TAF1BQ53T94 588 aaPredicted RBP20.24■□□□□ 0.83
HSPG2-205ENST00000427897 IRGCQ6NXR0 463 aa20.24■□□□□ 0.83
HSPG2-205ENST00000427897 C4orf22Q6V702 233 aa20.24■□□□□ 0.83
HSPG2-205ENST00000427897 FAM83HQ6ZRV2 1179 aaPredicted RBP20.24■□□□□ 0.83
HSPG2-205ENST00000427897 ARHGAP22Q7Z5H3 698 aa20.24■□□□□ 0.83
HSPG2-205ENST00000427897 SERPINA9Q86WD7 417 aa20.24■□□□□ 0.83
HSPG2-205ENST00000427897 NAT14Q8WUY8 206 aa20.24■□□□□ 0.83
HSPG2-205ENST00000427897 C9orf72Q96LT7 481 aa20.24■□□□□ 0.83
HSPG2-205ENST00000427897 CCM2Q9BSQ5 444 aa20.24■□□□□ 0.83
HSPG2-205ENST00000427897 DDA1Q9BW61 102 aa20.24■□□□□ 0.83
HSPG2-205ENST00000427897 HOMER3Q9NSC5 361 aa20.24■□□□□ 0.83
HSPG2-205ENST00000427897 ZKSCAN5Q9Y2L8 839 aa20.24■□□□□ 0.83
HSPG2-205ENST00000427897 CFAP20Q9Y6A4 193 aaKnown RBP20.24■□□□□ 0.83
HSPG2-205ENST00000427897 COLEC10Q9Y6Z7 277 aa20.24■□□□□ 0.83
HSPG2-205ENST00000427897 PRR19A6NJB7 356 aa20.23■□□□□ 0.83
HSPG2-205ENST00000427897 AGAP14A8MT82 685 aa20.23■□□□□ 0.83
HSPG2-205ENST00000427897 B4E171 279 aa20.23■□□□□ 0.83
HSPG2-205ENST00000427897 H7C0S8 307 aa20.23■□□□□ 0.83
HSPG2-205ENST00000427897 ZSCAN12O43309 604 aa20.23■□□□□ 0.83
HSPG2-205ENST00000427897 MSNP26038 577 aaKnown RBP20.23■□□□□ 0.83
HSPG2-205ENST00000427897 ACRV1P26436 265 aa20.23■□□□□ 0.83
HSPG2-205ENST00000427897 CXCR5P32302 372 aa20.23■□□□□ 0.83
HSPG2-205ENST00000427897 TSPAN7P41732 249 aa20.23■□□□□ 0.83
HSPG2-205ENST00000427897 ARMC6Q6NXE6 501 aa20.23■□□□□ 0.83
HSPG2-205ENST00000427897 CEACAM20Q6UY09 585 aa20.23■□□□□ 0.83
HSPG2-205ENST00000427897 IL22RA1Q8N6P7 574 aa20.23■□□□□ 0.83
HSPG2-205ENST00000427897 HM13Q8TCT9 377 aa20.23■□□□□ 0.83
HSPG2-205ENST00000427897 JPH3Q8WXH2 748 aaPredicted RBP20.23■□□□□ 0.83
HSPG2-205ENST00000427897 TEFMQ96QE5 360 aaKnown RBP20.23■□□□□ 0.83
HSPG2-205ENST00000427897 SMARCAL1Q9NZC9 954 aa20.23■□□□□ 0.83
HSPG2-205ENST00000427897 DRG1Q9Y295 367 aaKnown RBP20.23■□□□□ 0.83
HSPG2-205ENST00000427897 PCDHGA3Q9Y5H0 932 aa20.23■□□□□ 0.83
HSPG2-205ENST00000427897 B3GALT1Q9Y5Z6 326 aa20.23■□□□□ 0.83
HSPG2-205ENST00000427897 K7ENP7 123 aa20.22■□□□□ 0.83
HSPG2-205ENST00000427897 IFRD1O00458 451 aaPredicted RBP20.22■□□□□ 0.83
HSPG2-205ENST00000427897 POLR1CO15160 346 aaPredicted RBP20.22■□□□□ 0.83
HSPG2-205ENST00000427897 MTHFD1P11586 935 aaKnown RBP20.22■□□□□ 0.83
HSPG2-205ENST00000427897 SEPHS1P49903 392 aa20.22■□□□□ 0.83
HSPG2-205ENST00000427897 CDKN1CP49918 316 aaPredicted RBP20.22■□□□□ 0.83
HSPG2-205ENST00000427897 GFERP55789 205 aa20.22■□□□□ 0.83
HSPG2-205ENST00000427897 BASP1P80723 227 aaKnown RBP20.22■□□□□ 0.83
HSPG2-205ENST00000427897 MC2RQ01718 297 aa20.22■□□□□ 0.83
HSPG2-205ENST00000427897 RHDQ02161 417 aa20.22■□□□□ 0.83
HSPG2-205ENST00000427897 FOXM1Q08050 763 aa20.22■□□□□ 0.83
HSPG2-205ENST00000427897 CACHD1Q5VU97 1274 aa20.22■□□□□ 0.83
HSPG2-205ENST00000427897 ANKS6Q68DC2 871 aa20.22■□□□□ 0.83
HSPG2-205ENST00000427897 INO80CQ6PI98 192 aaPredicted RBP20.22■□□□□ 0.83
HSPG2-205ENST00000427897 PRUNE1Q86TP1 453 aa20.22■□□□□ 0.83
HSPG2-205ENST00000427897 LINC00615Q96LM1 132 aaPredicted RBP20.22■□□□□ 0.83
HSPG2-205ENST00000427897 CTRCQ99895 268 aa20.22■□□□□ 0.83
HSPG2-205ENST00000427897 ZPBPQ9BS86 351 aa20.22■□□□□ 0.83
HSPG2-205ENST00000427897 TLR10Q9BXR5 811 aa20.22■□□□□ 0.83
HSPG2-205ENST00000427897 OGFRQ9NZT2 677 aa20.22■□□□□ 0.83
HSPG2-205ENST00000427897 HEBP2Q9Y5Z4 205 aa20.22■□□□□ 0.83
HSPG2-205ENST00000427897 ZFHX4Q86UP3 3567 aa20.21■□□□□ 0.83
HSPG2-205ENST00000427897 C17orf113A0A1B0GUU1 675 aa20.21■□□□□ 0.83
HSPG2-205ENST00000427897 F8W8V4 182 aa20.21■□□□□ 0.83
HSPG2-205ENST00000427897 SUN1O94901 812 aa20.21■□□□□ 0.83
HSPG2-205ENST00000427897 ZSCAN5DPP0CG00 497 aa20.21■□□□□ 0.83
HSPG2-205ENST00000427897 ADRA1DP25100 572 aa20.21■□□□□ 0.83
HSPG2-205ENST00000427897 RPL22P35268 128 aaKnown RBP20.21■□□□□ 0.83
HSPG2-205ENST00000427897 PPARGP37231 505 aaPredicted RBP20.21■□□□□ 0.83
HSPG2-205ENST00000427897 PRLHRP49683 370 aa20.21■□□□□ 0.83
HSPG2-205ENST00000427897 ARL4DP49703 201 aa20.21■□□□□ 0.83
HSPG2-205ENST00000427897 PRAMEP78395 509 aa20.21■□□□□ 0.83
HSPG2-205ENST00000427897 SEMA5AQ13591 1074 aa20.21■□□□□ 0.83
HSPG2-205ENST00000427897 SOWAHCQ53LP3 525 aaPredicted RBP20.21■□□□□ 0.83
HSPG2-205ENST00000427897 LYPLAL1Q5VWZ2 237 aa20.21■□□□□ 0.83
HSPG2-205ENST00000427897 DRICH1Q6PGQ1 229 aaPredicted RBP20.21■□□□□ 0.83
HSPG2-205ENST00000427897 FAM92BQ6ZTR7 304 aa20.21■□□□□ 0.83
HSPG2-205ENST00000427897 PPHLN1Q8NEY8 458 aaKnown RBP20.21■□□□□ 0.83
HSPG2-205ENST00000427897 OR6P1Q8NGX9 317 aa20.21■□□□□ 0.83
HSPG2-205ENST00000427897 INSM2Q96T92 566 aaPredicted RBP20.21■□□□□ 0.83
HSPG2-205ENST00000427897 FBXO8Q9NRD0 319 aa20.21■□□□□ 0.83
HSPG2-205ENST00000427897 ANAPC5Q9UJX4 755 aa20.21■□□□□ 0.83
HSPG2-205ENST00000427897 MN1Q10571 1320 aaPredicted RBP20.21■□□□□ 0.83
HSPG2-205ENST00000427897 CELSR3Q9NYQ7 3312 aa20.2■□□□□ 0.82
HSPG2-205ENST00000427897 MROH6A6NGR9 719 aa20.2■□□□□ 0.82
HSPG2-205ENST00000427897 AP3B1O00203 1094 aa20.2■□□□□ 0.82
HSPG2-205ENST00000427897 QSOX1O00391 747 aa20.2■□□□□ 0.82
HSPG2-205ENST00000427897 TOX3O15405 576 aaPredicted RBP20.2■□□□□ 0.82
HSPG2-205ENST00000427897 C9P02748 559 aa20.2■□□□□ 0.82
HSPG2-205ENST00000427897 NDUFS1P28331 727 aa20.2■□□□□ 0.82
HSPG2-205ENST00000427897 NSG1P42857 185 aa20.2■□□□□ 0.82
HSPG2-205ENST00000427897 CAPZBP47756 277 aa20.2■□□□□ 0.82
HSPG2-205ENST00000427897 LEPRP48357 1165 aaKnown RBP20.2■□□□□ 0.82
HSPG2-205ENST00000427897 NLRP9Q7RTR0 991 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms