RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 NLGN4YQ8NFZ3 816 aaPredicted RBP9.1□□□□□ -0.95
NUP50-206ENST00000422489 RSC1A1Q92681 617 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 C12orf66Q96MD2 445 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 OR6C1Q96RD1 312 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 INSM2Q96T92 566 aaPredicted RBP9.1□□□□□ -0.95
NUP50-206ENST00000422489 COPS8Q99627 209 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 GPN2Q9H9Y4 310 aaPredicted RBP9.1□□□□□ -0.95
NUP50-206ENST00000422489 PIH1D1Q9NWS0 290 aaKnown RBP9.1□□□□□ -0.95
NUP50-206ENST00000422489 IMPACTQ9P2X3 320 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 PILRAQ9UKJ1 303 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 R3HDM2Q9Y2K5 976 aaKnown RBP9.1□□□□□ -0.95
NUP50-206ENST00000422489 RP1P56715 2156 aa9.1□□□□□ -0.95
NUP50-206ENST00000422489 TCRBV7S2A1N4TA0A589 114 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 CCDC78A2IDD5 438 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 GOLGA6L6A8MZA4 724 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 CFAP99D6REC4 459 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 NKX2-8O15522 239 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 PSMD3O43242 534 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 ZNF189O75820 626 aaPredicted RBP9.09□□□□□ -0.95
NUP50-206ENST00000422489 ITGB2P05107 769 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 SLC35G4P0C7Q5 338 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 PRKAR1AP10644 381 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 PLA2G2AP14555 144 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 MC4RP32245 332 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 HADHAP40939 763 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 LMAN1P49257 510 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 CDKN1CP49918 316 aaPredicted RBP9.09□□□□□ -0.95
NUP50-206ENST00000422489 XIAPP98170 497 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 DMPKQ09013 629 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 METRNLQ641Q3 311 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 ARMC6Q6NXE6 501 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 DUS1LQ6P1R4 473 aaKnown RBP9.09□□□□□ -0.95
NUP50-206ENST00000422489 C16orf46Q6P387 395 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 KLHL35Q6PF15 583 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 XKR5Q6UX68 686 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 C6orf15Q6UXA7 325 aaPredicted RBP9.09□□□□□ -0.95
NUP50-206ENST00000422489 MICALCLQ6ZW33 695 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 TMEM139Q8IV31 216 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 SIDT2Q8NBJ9 832 aaKnown RBP9.09□□□□□ -0.95
NUP50-206ENST00000422489 GPR150Q8NGU9 434 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 OR2L2Q8NH16 312 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 ULK4Q96C45 1275 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 FERD3LQ96RJ6 166 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 TMEM121Q9BTD3 319 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 SLC12A9Q9BXP2 914 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 ULBP3Q9BZM4 244 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 SPRY4Q9C004 299 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 FAM117AQ9C073 453 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 TRIT1Q9H3H1 467 aaKnown RBP9.09□□□□□ -0.95
NUP50-206ENST00000422489 SMOXQ9NWM0 555 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 HRASLS2Q9NWW9 162 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 ACSL5Q9ULC5 683 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 GUCA1BQ9UMX6 200 aa9.09□□□□□ -0.95
NUP50-206ENST00000422489 HEMK1Q9Y5R4 338 aaPredicted RBP9.09□□□□□ -0.95
NUP50-206ENST00000422489 MN1Q10571 1320 aaPredicted RBP9.08□□□□□ -0.96
NUP50-206ENST00000422489 UBA6A0AVT1 1052 aaPredicted RBP9.08□□□□□ -0.96
NUP50-206ENST00000422489 OR6C74A6NCV1 312 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 ZNF891A8MT65 544 aaPredicted RBP9.08□□□□□ -0.96
NUP50-206ENST00000422489 PYCARD-AS1I3L0S3 204 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 TOX3O15405 576 aaPredicted RBP9.08□□□□□ -0.96
NUP50-206ENST00000422489 LDB2O43679 373 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 SLC28A2O43868 658 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 KATNA1O75449 491 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 SPAG6O75602 509 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 KIAA0754O94854 1291 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 ANKRD34CP0C6C1 535 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 CCNYL3P0C7X3 344 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 PRSS56P0CW18 603 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 MTHFD1P11586 935 aaKnown RBP9.08□□□□□ -0.96
NUP50-206ENST00000422489 ATP1B2P14415 290 aaPredicted RBP9.08□□□□□ -0.96
NUP50-206ENST00000422489 ZNF28P17035 718 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 ITGALP20701 1170 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 CDC25BP30305 580 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 CAPZBP47756 277 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 ARCN1P48444 511 aaKnown RBP9.08□□□□□ -0.96
NUP50-206ENST00000422489 PPP1CAP62136 330 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 ABHD18Q0P651 414 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 MSLNQ13421 630 aaPredicted RBP9.08□□□□□ -0.96
NUP50-206ENST00000422489 SNX1Q13596 522 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 POU6F1Q14863 301 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 DNTTIP2Q5QJE6 756 aaKnown RBP9.08□□□□□ -0.96
NUP50-206ENST00000422489 SEL1L2Q5TEA6 688 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 ZNF449Q6P9G9 518 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 PRICKLE2Q7Z3G6 844 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 SNX20Q7Z614 316 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 SERPINA9Q86WD7 417 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 NXPE1Q8N323 547 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 RNF10Q8N5U6 811 aaKnown RBP9.08□□□□□ -0.96
NUP50-206ENST00000422489 ESX1Q8N693 406 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 LILRA3Q8N6C8 439 aaPredicted RBP9.08□□□□□ -0.96
NUP50-206ENST00000422489 DNAAF3Q8N9W5 541 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 GALNT6Q8NCL4 622 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 PHC3Q8NDX5 983 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 OR4E2Q8NGC2 313 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 HEXDCQ8WVB3 486 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 ATG4AQ8WYN0 398 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 KLHL6Q8WZ60 621 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 HES6Q96HZ4 224 aa9.08□□□□□ -0.96
NUP50-206ENST00000422489 DNAJC1Q96KC8 554 aaKnown RBP9.08□□□□□ -0.96
NUP50-206ENST00000422489 MAP3K3Q99759 626 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms