RNA–Protein interactions for RNA: ENST00000420246.6

TP53-204, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-204ENST00000420246 C2orf49Q9BVC5 232 aaPredicted RBP11.8□□□□□ -0.52
TP53-204ENST00000420246 NANOGQ9H9S0 305 aa11.8□□□□□ -0.52
TP53-204ENST00000420246 PFDN4Q9NQP4 134 aa11.8□□□□□ -0.52
TP53-204ENST00000420246 ELOVL2Q9NXB9 296 aa11.8□□□□□ -0.52
TP53-204ENST00000420246 LEF1Q9UJU2 399 aaPredicted RBP11.8□□□□□ -0.52
TP53-204ENST00000420246 ST14Q9Y5Y6 855 aa11.8□□□□□ -0.52
TP53-204ENST00000420246 ANAPC1Q9H1A4 1944 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 BPIP17213 487 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 IL10P22301 178 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 TXNL4AP83876 142 aaKnown RBP11.79□□□□□ -0.52
TP53-204ENST00000420246 PLIN5Q00G26 463 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 PLOD1Q02809 727 aaPredicted RBP11.79□□□□□ -0.52
TP53-204ENST00000420246 NR6A1Q15406 480 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 PHKG1Q16816 387 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 PDCD4Q53EL6 469 aaKnown RBP11.79□□□□□ -0.52
TP53-204ENST00000420246 NHSL2Q5HYW2 709 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 AP1ARQ63HQ0 302 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 PPP4R4Q6NUP7 873 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 ZSWIM9Q86XI8 627 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 EPHX4Q8IUS5 362 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 CMTR2Q8IYT2 770 aaKnown RBP11.79□□□□□ -0.52
TP53-204ENST00000420246 SLC39A11Q8N1S5 342 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 ZNF296Q8WUU4 475 aaPredicted RBP11.79□□□□□ -0.52
TP53-204ENST00000420246 CFHR5Q9BXR6 569 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 MRPS26Q9BYN8 205 aaKnown RBP11.79□□□□□ -0.52
TP53-204ENST00000420246 TRIM15Q9C019 465 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 ACTL8Q9H568 366 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 TLR9Q9NR96 1032 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 AGPAT4Q9NRZ5 378 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 TMCO1Q9UM00 188 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 VILLO15195 856 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 TAPBPO15533 448 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 HNRNPRO43390 633 aaKnown RBP11.79□□□□□ -0.52
TP53-204ENST00000420246 BNIP3LO60238 219 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 GNRH1P01148 92 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 MT-ND1P03886 318 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 MRPL19P49406 292 aaKnown RBP11.79□□□□□ -0.52
TP53-204ENST00000420246 CREB5Q02930 508 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 PRKG2Q13237 762 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 APOFQ13790 326 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 RBBP5Q15291 538 aaKnown RBP11.79□□□□□ -0.52
TP53-204ENST00000420246 CHRNA6Q15825 494 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 CDKN3Q16667 212 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 MYLK3Q32MK0 819 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 SNX20Q7Z614 316 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 TSPAN33Q86UF1 283 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 RALGPS2Q86X27 583 aaPredicted RBP11.79□□□□□ -0.52
TP53-204ENST00000420246 BBS7Q8IWZ6 715 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 RBFAQ8N0V3 343 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 DGCR14Q96DF8 476 aaKnown RBP11.79□□□□□ -0.52
TP53-204ENST00000420246 ZNF558Q96NG5 402 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 ABCG8Q9H221 673 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 GPBP1L1Q9HC44 474 aaPredicted RBP11.79□□□□□ -0.52
TP53-204ENST00000420246 ZIM2Q9NZV7 527 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 TNPO3Q9Y5L0 923 aaKnown RBP11.79□□□□□ -0.52
TP53-204ENST00000420246 V9GYQ6 96 aa11.79□□□□□ -0.52
TP53-204ENST00000420246 FAM234BA2RU67 622 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 CCDC160A6NGH7 325 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 FFAR3O14843 346 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 LSM1O15116 133 aaKnown RBP11.78□□□□□ -0.52
TP53-204ENST00000420246 RAD51BO15315 384 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 GPR42O15529 346 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 ZNF821O75541 412 aaPredicted RBP11.78□□□□□ -0.52
TP53-204ENST00000420246 RSL1D1O76021 490 aaKnown RBP11.78□□□□□ -0.52
TP53-204ENST00000420246 LATS1O95835 1130 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 S100BP04271 92 aaPredicted RBP11.78□□□□□ -0.52
TP53-204ENST00000420246 URODP06132 367 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 CKMP06732 381 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 GJA1P17302 382 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 ITGALP20701 1170 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 FASP25445 335 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 RPL10P27635 214 aaKnown RBP11.78□□□□□ -0.52
TP53-204ENST00000420246 GABRR2P28476 465 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 CD70P32970 193 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 DGKQP52824 942 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 TLE2Q04725 743 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 TRAF3Q13114 568 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 AP5B1Q2VPB7 878 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 DGKKQ5KSL6 1271 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 GAREM2Q75VX8 874 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 MILR1Q7Z6M3 343 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 ZFAND4Q86XD8 727 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 TCEAL8Q8IYN2 117 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 VWCEQ96DN2 955 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 PPM1MQ96MI6 270 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 EGFL8Q99944 293 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 EPB41L1Q9H4G0 881 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 CAAP1Q9H8G2 361 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 CRLS1Q9UJA2 301 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 GLYATL1P3A0A0U1RQE8 302 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 DLGAP1O14490 977 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 NRG2O14511 850 aaPredicted RBP11.78□□□□□ -0.52
TP53-204ENST00000420246 TEX28O15482 410 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 OLFM2O95897 454 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 GNAO1P09471 354 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 ACRV1P26436 265 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 CA8P35219 290 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 LMAN2Q12907 356 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 IRAK1BP1Q5VVH5 260 aa11.78□□□□□ -0.52
TP53-204ENST00000420246 KRT80Q6KB66 452 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms