RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 PSMD13Q9UNM6 376 aa19.91■□□□□ 0.78
GTF3A-202ENST00000419181 CCDC162PA2VCL2 907 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 KIF5CO60282 957 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 CCL4P13236 92 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 FOXN2P32314 431 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 ACVR1Q04771 509 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 RPE65Q16518 533 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 DBN1Q16643 649 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 TSTD2Q5T7W7 516 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 TTC27Q6P3X3 843 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 NLRP9Q7RTR0 991 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 ARHGAP22Q7Z5H3 698 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 JAMLQ86YT9 394 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 AGBL5Q8NDL9 886 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 COG1Q8WTW3 980 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 CRELD1Q96HD1 420 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 ZNF778Q96MU6 729 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 DPH1Q9BZG8 443 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 SLC2A6Q9UGQ3 507 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 ACSL5Q9ULC5 683 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 TCAF1Q9Y4C2 921 aa19.9■□□□□ 0.78
GTF3A-202ENST00000419181 MN1Q10571 1320 aaPredicted RBP19.9■□□□□ 0.78
GTF3A-202ENST00000419181 OR51F1A6NGY5 319 aa19.89■□□□□ 0.77
GTF3A-202ENST00000419181 PGRMC1O00264 195 aaKnown RBP19.89■□□□□ 0.77
GTF3A-202ENST00000419181 PRAMEF10O60809 474 aa19.89■□□□□ 0.77
GTF3A-202ENST00000419181 UBXN7O94888 489 aa19.89■□□□□ 0.77
GTF3A-202ENST00000419181 CSTF2P33240 577 aaKnown RBP eCLIP19.89■□□□□ 0.77
GTF3A-202ENST00000419181 MAPK10P53779 464 aa19.89■□□□□ 0.77
GTF3A-202ENST00000419181 CYP1B1Q16678 543 aa19.89■□□□□ 0.77
GTF3A-202ENST00000419181 KCTD19Q17RG1 926 aaPredicted RBP19.89■□□□□ 0.77
GTF3A-202ENST00000419181 ZNF658BQ4V348 819 aaPredicted RBP19.89■□□□□ 0.77
GTF3A-202ENST00000419181 GPR150Q8NGU9 434 aa19.89■□□□□ 0.77
GTF3A-202ENST00000419181 HM13Q8TCT9 377 aa19.89■□□□□ 0.77
GTF3A-202ENST00000419181 PEX13Q92968 403 aa19.89■□□□□ 0.77
GTF3A-202ENST00000419181 OSBPL9Q96SU4 736 aa19.89■□□□□ 0.77
GTF3A-202ENST00000419181 NAP1L3Q99457 506 aaPredicted RBP19.89■□□□□ 0.77
GTF3A-202ENST00000419181 AP1M1Q9BXS5 423 aa19.89■□□□□ 0.77
GTF3A-202ENST00000419181 B3GNT4Q9C0J1 378 aa19.89■□□□□ 0.77
GTF3A-202ENST00000419181 WWP1Q9H0M0 922 aa19.89■□□□□ 0.77
GTF3A-202ENST00000419181 FAM8A1Q9UBU6 413 aa19.89■□□□□ 0.77
GTF3A-202ENST00000419181 SSUH2Q9Y2M2 353 aa19.89■□□□□ 0.77
GTF3A-202ENST00000419181 C17orf113A0A1B0GUU1 675 aa19.88■□□□□ 0.77
GTF3A-202ENST00000419181 C9orf172C9J069 976 aa19.88■□□□□ 0.77
GTF3A-202ENST00000419181 C9P02748 559 aa19.88■□□□□ 0.77
GTF3A-202ENST00000419181 FGF3P11487 239 aaPredicted RBP19.88■□□□□ 0.77
GTF3A-202ENST00000419181 MTHFD1P11586 935 aaKnown RBP19.88■□□□□ 0.77
GTF3A-202ENST00000419181 TYRP1P17643 537 aa19.88■□□□□ 0.77
GTF3A-202ENST00000419181 CDK16Q00536 496 aa19.88■□□□□ 0.77
GTF3A-202ENST00000419181 ITIH4Q14624 930 aa19.88■□□□□ 0.77
GTF3A-202ENST00000419181 AFTPHQ6ULP2 937 aa19.88■□□□□ 0.77
GTF3A-202ENST00000419181 PLXDC1Q8IUK5 500 aa19.88■□□□□ 0.77
GTF3A-202ENST00000419181 LILRA3Q8N6C8 439 aaPredicted RBP19.88■□□□□ 0.77
GTF3A-202ENST00000419181 CLDN19Q8N6F1 224 aa19.88■□□□□ 0.77
GTF3A-202ENST00000419181 ACTRT1Q8TDG2 376 aa19.88■□□□□ 0.77
GTF3A-202ENST00000419181 USP7Q93009 1102 aa19.88■□□□□ 0.77
GTF3A-202ENST00000419181 HDAC10Q969S8 669 aa19.88■□□□□ 0.77
GTF3A-202ENST00000419181 MAGOHBQ96A72 148 aaKnown RBP19.88■□□□□ 0.77
GTF3A-202ENST00000419181 INSM2Q96T92 566 aaPredicted RBP19.88■□□□□ 0.77
GTF3A-202ENST00000419181 IMP3Q9NV31 184 aaKnown RBP19.88■□□□□ 0.77
GTF3A-202ENST00000419181 SMARCAL1Q9NZC9 954 aa19.88■□□□□ 0.77
GTF3A-202ENST00000419181 FOXJ2Q9P0K8 574 aa19.88■□□□□ 0.77
GTF3A-202ENST00000419181 IGSF10Q6WRI0 2623 aa19.88■□□□□ 0.77
GTF3A-202ENST00000419181 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.87■□□□□ 0.77
GTF3A-202ENST00000419181 USP27XA6NNY8 438 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 KLK10O43240 276 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 AP2A2O94973 939 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 GOT2P00505 430 aaKnown RBP19.87■□□□□ 0.77
GTF3A-202ENST00000419181 SLC35G4P0C7Q5 338 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 TPSB2P20231 275 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 NSG1P42857 185 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 CAPZBP47756 277 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 GFERP55789 205 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 TRIP13Q15645 432 aaPredicted RBP19.87■□□□□ 0.77
GTF3A-202ENST00000419181 TPSAB1Q15661 275 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 PCID2Q5JVF3 399 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 SNAP47Q5SQN1 464 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 PACS1Q6VY07 963 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 ZNF534Q76KX8 674 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 CFAP206Q8IYR0 622 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 PPHLN1Q8NEY8 458 aaKnown RBP19.87■□□□□ 0.77
GTF3A-202ENST00000419181 SPDYE1Q8NFV5 336 aaPredicted RBP19.87■□□□□ 0.77
GTF3A-202ENST00000419181 RSC1A1Q92681 617 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 SGSM3Q96HU1 749 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 RMDN2Q96LZ7 410 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 CCM2Q9BSQ5 444 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 IL22Q9GZX6 179 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 VPS37BQ9H9H4 285 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 SNX12Q9UMY4 172 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 PCDHGA3Q9Y5H0 932 aa19.87■□□□□ 0.77
GTF3A-202ENST00000419181 A8MU76 341 aa19.86■□□□□ 0.77
GTF3A-202ENST00000419181 B4E171 279 aa19.86■□□□□ 0.77
GTF3A-202ENST00000419181 AP3B1O00203 1094 aa19.86■□□□□ 0.77
GTF3A-202ENST00000419181 CES2O00748 559 aa19.86■□□□□ 0.77
GTF3A-202ENST00000419181 ANKRD34CP0C6C1 535 aa19.86■□□□□ 0.77
GTF3A-202ENST00000419181 AMD1P17707 334 aa19.86■□□□□ 0.77
GTF3A-202ENST00000419181 COILP38432 576 aaPredicted RBP19.86■□□□□ 0.77
GTF3A-202ENST00000419181 TSPAN7P41732 249 aa19.86■□□□□ 0.77
GTF3A-202ENST00000419181 MAGEA6P43360 314 aa19.86■□□□□ 0.77
GTF3A-202ENST00000419181 SESN2P58004 480 aaPredicted RBP19.86■□□□□ 0.77
GTF3A-202ENST00000419181 CLN3Q13286 438 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms