RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CIDEAO60543 219 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 CREG1O75629 220 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 PRSS1P07477 247 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 ACP2P11117 423 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 CDKN1AP38936 164 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 SLC15A1P46059 708 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 MFAP4P55083 255 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 KRTAP10-7P60409 375 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 KCNC3Q14003 757 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 MEA1Q16626 185 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 OTUD3Q5T2D3 398 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 C4orf50Q6ZRC1 276 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 OR10V1Q8NGI7 309 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 STAMBPL1Q96FJ0 436 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 PRMT6Q96LA8 375 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 SMARCAD1Q9H4L7 1026 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 APOBEC3GQ9HC16 384 aaKnown RBP4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 TBC1D22BQ9NU19 505 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 SLC38A7Q9NVC3 462 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 MIOSQ9NXC5 875 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 TAS2R14Q9NYV8 317 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 ZNF624Q9P2J8 865 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 SEC63Q9UGP8 760 aaKnown RBP4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 ERRFI1Q9UJM3 462 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 PNMA2Q9UL42 364 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 TCF19Q9Y242 345 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 JRKLQ9Y4A0 524 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 OR2A25A4D2G3 310 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 FAM72CH0Y354 149 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 TO15178 435 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 NR3C1P04150 777 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 ACSL1P33121 698 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 CXCL9Q07325 125 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 PNRC1Q12796 327 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 AIMP2Q13155 320 aaKnown RBP4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 DUOXA1Q1HG43 343 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 FAM98BQ52LJ0 330 aaKnown RBP4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 FAM72AQ5TYM5 149 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 SLC35E4Q6ICL7 350 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 FAM72DQ6L9T8 149 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 SLC27A1Q6PCB7 646 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 GSG1LQ6UXU4 331 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 CEACAM20Q6UY09 585 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 RBMS3Q6XE24 437 aaKnown RBP4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 DENND5BQ6ZUT9 1274 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 TRPT1Q86TN4 253 aaKnown RBP4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 FAM72BQ86X60 149 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 STPG4Q8N801 248 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 TRIM58Q8NG06 486 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 ZFAND2BQ8WV99 257 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 TM9SF4Q92544 642 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 C1QTNF1Q9BXJ1 281 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 SYNCQ9H7C4 482 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 SLC52A3Q9NQ40 469 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 HAUS2Q9NVX0 235 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 FAM118AQ9NWS6 357 aa4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 DDX43Q9NXZ2 648 aaKnown RBP4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 ADD3Q9UEY8 706 aaKnown RBP4.12□□□□□ -1.75
HMGB1P49-201ENST00000418882 PRSS51A0A1B0GVH4 220 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 DUXAA6NLW8 204 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 SMIM1B2RUZ4 78 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 NDUFS4O43181 175 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 CD48P09326 243 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 ERVK-10P10266 1014 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 TMF1P82094 1093 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 GAGE2BQ13066 116 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 GAGE2EQ4V326 116 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 HYIQ5T013 277 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 FAM109BQ6ICB4 259 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 FAM53AQ6NSI3 398 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 GAGE2AQ6NT46 116 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 KBTBD6Q86V97 674 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 APLFQ8IW19 511 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 RDM1Q8NG50 284 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 FAM76AQ8TAV0 307 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 ERLEC1Q96DZ1 483 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 SAT2Q96F10 170 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 F2RL3Q96RI0 385 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 PAFAH2Q99487 392 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 LITAFQ99732 161 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 SDF4Q9BRK5 362 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 C16orf70Q9BSU1 422 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 BICC1Q9H694 974 aaKnown RBP4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 DENND2DQ9H6A0 471 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 NPAP1Q9NZP6 1156 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 RHCGQ9UBD6 479 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 GAGE2DQ9UEU5 116 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 FLT1P17948 1338 aa4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 RSF1Q96T23 1441 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P49-201ENST00000418882 H0YIN7 160 aa4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 CTDSP2O14595 271 aa4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 ADAMDEC1O15204 470 aa4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 GPR137BO60478 399 aa4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 CKMT2P17540 419 aa4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 GCH1P30793 250 aa4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 NR0B1P51843 470 aaKnown RBP4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 EIF5P55010 431 aaKnown RBP4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 MFAP5Q13361 173 aa4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 MELKQ14680 651 aa4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 SFMBT2Q5VUG0 894 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms