RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CYB5D1Q6P9G0 228 aa17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 BORAQ6PGQ7 559 aa17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 FAM83HQ6ZRV2 1179 aaPredicted RBP17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 PEX26Q7Z412 305 aa17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 SYCE1Q8N0S2 351 aa17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 UBL4BQ8N7F7 174 aa17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 KLHL6Q8WZ60 621 aa17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 ULK4Q96C45 1275 aa17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 BAG1Q99933 345 aaPredicted RBP17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 TBL1YQ9BQ87 522 aa17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 ADNPQ9H2P0 1102 aa17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 ARNT2Q9HBZ2 717 aa17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 STARD5Q9NSY2 213 aa17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 GEMIN8Q9NWZ8 242 aaKnown RBP17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 ACSL5Q9ULC5 683 aa17.22■□□□□ 0.35
PDLIM2-208ENST00000416159 GCN1Q92616 2671 aaKnown RBP17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 AGAP14A8MT82 685 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 MIF4GDA9UHW6 222 aaKnown RBP17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 SLC28A2O43868 658 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 KIF1CO43896 1103 aaKnown RBP17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 PTMAP06454 111 aaKnown RBP17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 RALBP11234 206 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 PBLDP30039 288 aaPredicted RBP17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 HADHAP40939 763 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 MC1RQ01726 317 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 OLIG2Q13516 323 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 BCL7AQ4VC05 210 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 FAM92BQ6ZTR7 304 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 DET1Q7L5Y6 550 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 KLHDC8BQ8IXV7 354 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 OR13C4Q8NGS5 318 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 GPR150Q8NGU9 434 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 OR2L2Q8NH16 312 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 HEXDCQ8WVB3 486 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 ZFPM2Q8WW38 1151 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 UBXN4Q92575 508 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 DCUN1D1Q96GG9 259 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 LINC00615Q96LM1 132 aaPredicted RBP17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 OR6C1Q96RD1 312 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 ULBP3Q9BZM4 244 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 SEMA5BQ9P283 1151 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 CRLS1Q9UJA2 301 aa17.21■□□□□ 0.35
PDLIM2-208ENST00000416159 ZNF106Q9H2Y7 1883 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 NKX2-8O15522 239 aa17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 MTHFD1P11586 935 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 FGF5P12034 268 aa17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 NELFEP18615 380 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 ITGALP20701 1170 aa17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 SH3BP2P78314 561 aa17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 KIF5AQ12840 1032 aa17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 PLCL1Q15111 1095 aa17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 PARP6Q2NL67 630 aa17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 DENND5AQ6IQ26 1287 aa17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 C6orf15Q6UXA7 325 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 ARHGEF18Q6ZSZ5 1173 aa17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 RASGRP3Q8IV61 690 aa17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 UNC5BQ8IZJ1 945 aa17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 INSM2Q96T92 566 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 WWP1Q9H0M0 922 aa17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 IMP3Q9NV31 184 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 RPS6KL1Q9Y6S9 549 aa17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 CFAP46Q8IYW2 2715 aa17.2■□□□□ 0.34
PDLIM2-208ENST00000416159 CFAP99D6REC4 459 aa17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 STAT5AP42229 794 aa17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 CCR10P46092 362 aa17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 ZNF140P52738 457 aaPredicted RBP17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 TMPRSS15P98073 1019 aa17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 SPARCL1Q14515 664 aa17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 CRTC2Q53ET0 693 aaPredicted RBP17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 SNX20Q7Z614 316 aa17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 PPP1R3BQ86XI6 285 aa17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 SIDT2Q8NBJ9 832 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 SLC41A2Q96JW4 573 aa17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 C12orf66Q96MD2 445 aa17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 CD180Q99467 661 aa17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 CCM2Q9BSQ5 444 aa17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 SLC25A18Q9H1K4 315 aa17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 PDE7BQ9NP56 450 aa17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 IL17BQ9UHF5 180 aa17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 CFAP20Q9Y6A4 193 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-208ENST00000416159 SPTA1P02549 2419 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 GOLGA6L3A6NEY3 463 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 PSMD3O43242 534 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 SPAG6O75602 509 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 KIAA0754O94854 1291 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 ZIC2O95409 532 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 MT-ND3P03897 115 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 SLC35G4P0C7Q5 338 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 ZNF28P17035 718 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 NDUFS1P28331 727 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 PRLHRP49683 370 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 CDC20Q12834 499 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 GSE1Q14687 1217 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 GPR33Q49SQ1 333 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 KCTD11Q693B1 232 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 PRICKLE2Q7Z3G6 844 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 BPHLQ86WA6 291 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 OOSP2Q86WS3 158 aa17.18■□□□□ 0.34
PDLIM2-208ENST00000416159 KMT5CQ86Y97 462 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms