RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 HOXD3P31249 432 aaPredicted RBP5.06□□□□□ -1.6
LSM5-206ENST00000409987 LIMK1P53667 647 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 CSNK2A1P68400 391 aaPredicted RBP5.06□□□□□ -1.6
LSM5-206ENST00000409987 CXCL9Q07325 125 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 Q0VFX4 171 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 RCN2Q14257 317 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 DAB2IPQ5VWQ8 1189 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 NSUN5P2Q63ZY6 315 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 DUS1LQ6P1R4 473 aaKnown RBP5.06□□□□□ -1.6
LSM5-206ENST00000409987 KCTD18Q6PI47 426 aaPredicted RBP5.06□□□□□ -1.6
LSM5-206ENST00000409987 C1QL2Q7Z5L3 287 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 CAMKMTQ7Z624 323 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 TECPR1Q7Z6L1 1165 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 MCEMP1Q8IX19 187 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 ATAD1Q8NBU5 361 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 CAMKVQ8NCB2 501 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 CSNK2A3Q8NEV1 391 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 OR1J2Q8NGS2 313 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 HM13Q8TCT9 377 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 ORAI1Q96D31 301 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 CEP295NLQ96MC4 621 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 C1QTNF7Q9BXJ2 289 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 DENND2DQ9H6A0 471 aaPredicted RBP5.06□□□□□ -1.6
LSM5-206ENST00000409987 C17orf75Q9HAS0 396 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 NOX4Q9NPH5 578 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 GDE1Q9NZC3 331 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 HOOK1Q9UJC3 728 aaKnown RBP5.06□□□□□ -1.6
LSM5-206ENST00000409987 AGO1Q9UL18 857 aaKnown RBP5.06□□□□□ -1.6
LSM5-206ENST00000409987 THOC2Q8NI27 1593 aaKnown RBP5.06□□□□□ -1.6
LSM5-206ENST00000409987 ZNF521Q96K83 1311 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 GPR75-ASB3A0A0A6YYF3 556 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 A0A1W2PRV1 198 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 ENO4A6NNW6 628 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 CCDC188H7C350 402 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 MPHOSPH10O00566 681 aaKnown RBP5.05□□□□□ -1.6
LSM5-206ENST00000409987 RTN2O75298 545 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 SLCO2B1O94956 709 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 PENKP01210 267 aaPredicted RBP5.05□□□□□ -1.6
LSM5-206ENST00000409987 EEF2P13639 858 aaKnown RBP5.05□□□□□ -1.6
LSM5-206ENST00000409987 TCEA1P23193 301 aaKnown RBP5.05□□□□□ -1.6
LSM5-206ENST00000409987 C21orf33P30042 268 aaPredicted RBP5.05□□□□□ -1.6
LSM5-206ENST00000409987 BDKRB2P30411 391 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 ARRB2P32121 409 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 CASP3P42574 277 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 NT5C2P49902 561 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 ZNF81P51508 661 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 HNRNPH2P55795 449 aaKnown RBP5.05□□□□□ -1.6
LSM5-206ENST00000409987 STARD6P59095 220 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 RALGDSQ12967 914 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 ZNF273Q14593 569 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 AMZ1Q400G9 498 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 ANKRD20A4Q4UJ75 823 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 ANKRD20A8PQ5CZ79 823 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 ANKRD20A2Q5SQ80 823 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 DCST1Q5T197 706 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 ANKRD20A1Q5TYW2 823 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 ANKRD20A3Q5VUR7 823 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 FRG2Q64ET8 278 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 ZNF425Q6IV72 752 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 DSG4Q86SJ6 1040 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 RPAINQ86UA6 219 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 IQCHQ86VS3 1027 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 HOOK3Q86VS8 718 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 NRROSQ86YC3 692 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 PCDH20Q8N6Y1 951 aaKnown RBP5.05□□□□□ -1.6
LSM5-206ENST00000409987 ANKRD20A12PQ8NF67 263 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 PTPMT1Q8WUK0 201 aaPredicted RBP5.05□□□□□ -1.6
LSM5-206ENST00000409987 ZFAND2BQ8WV99 257 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 MOAP1Q96BY2 351 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 C16orf45Q96MC5 204 aaPredicted RBP5.05□□□□□ -1.6
LSM5-206ENST00000409987 NUDCD1Q96RS6 583 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 KXD1Q9BQD3 176 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 MMTAG2Q9BU76 263 aaKnown RBP5.05□□□□□ -1.6
LSM5-206ENST00000409987 SLC29A3Q9BZD2 475 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 DNAJB4Q9UDY4 337 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 STK39Q9UEW8 545 aa5.05□□□□□ -1.6
LSM5-206ENST00000409987 LEF1Q9UJU2 399 aaPredicted RBP5.05□□□□□ -1.6
LSM5-206ENST00000409987 hDV102S1A0JD36 115 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 SPINT2O43291 252 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 PLPP2O43688 288 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 PRLRP16471 622 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 PTPN3P26045 913 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 APOBEC1P41238 236 aaKnown RBP5.04□□□□□ -1.6
LSM5-206ENST00000409987 LCN10Q6JVE6 187 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 SPATA19Q7Z5L4 167 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 CCDC190Q86UF4 302 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 CHERPQ8IWX8 916 aaKnown RBP5.04□□□□□ -1.6
LSM5-206ENST00000409987 PEX5LQ8IYB4 626 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 RASGEF1CQ8N431 466 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 GUF1Q8N442 669 aaKnown RBP5.04□□□□□ -1.6
LSM5-206ENST00000409987 TSPAN14Q8NG11 270 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 OR14A16Q8NHC5 309 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 HMGCLL1Q8TB92 370 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 HMCESQ96FZ2 354 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 LINC00615Q96LM1 132 aaPredicted RBP5.04□□□□□ -1.6
LSM5-206ENST00000409987 ZNF48Q96MX3 618 aaPredicted RBP5.04□□□□□ -1.6
LSM5-206ENST00000409987 CAMK1GQ96NX5 476 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 SLC25A33Q9BSK2 321 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 DNAJC18Q9H819 358 aa5.04□□□□□ -1.6
LSM5-206ENST00000409987 DCAF16Q9NXF7 216 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms